Analysis of interatomic Contacts of Structural Units in PDB entry:
3PZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PZG entry

There is 1 chain in PDB entry 3PZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 37PHE 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3PZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 66Right-handed alpha
Helix 2
2
A
78 86Right-handed alpha
Helix 3
3
A
108 123Right-handed alpha
Helix 4
4
A
138 147Right-handed alpha
Helix 5
5
A
153 158Right-handed alpha
Helix 6
6
A
158 174Right-handed alpha
Helix 7
7
A
183 187Right-handed 310
Helix 8
8
A
207 225Right-handed alpha
Helix 9
9
A
246 250Right-handed 310
Helix 10
10
A
251 255Right-handed 310
Helix 11
11
A
262 268Right-handed alpha
Helix 12
12
A
280 284Right-handed 310
Helix 13
13
A
287 289Right-handed 310
Helix 14
14
A
290 310Right-handed alpha
Helix 15
15
A
327 342Right-handed alpha
Helix 16
16
A
380 391Right-handed alpha
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There are 2 sheets in PDB entry 3PZG. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 231first strand
Strand 2
A
190 194parallel
Strand 3
A
125 129parallel
Strand 4
A
69 73parallel
Strand 5
A
39 43parallel
Strand 6
A
346 349parallel
Strand 7
A
313 318parallel
Strand 8
A
275 279parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
106 107parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il