Analysis of interatomic Contacts of Structural Units in PDB entry:
3PZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3PZV entry

There are 4 chains in PDB entry 3PZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 34GLY 331
B
 THR 34GLY 331
C
 THR 34GLY 331
D
 THR 34GLY 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 3PZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 71Right-handed alpha
Helix 2
2
A
72 74Right-handed 310
Helix 3
3
A
75 87Right-handed alpha
Helix 4
4
A
105 107Right-handed 310
Helix 5
5
A
108 123Right-handed alpha
Helix 6
6
A
137 140Right-handed 310
Helix 7
7
A
141 157Right-handed alpha
Helix 8
8
A
179 193Right-handed alpha
Helix 9
9
A
204 209Right-handed alpha
Helix 10
10
A
210 217Right-handed alpha
Helix 11
11
A
236 249Right-handed alpha
Helix 12
12
A
270 284Right-handed alpha
Helix 13
13
A
319 328Right-handed alpha
Helix 14
14
B
34 40Right-handed alpha
Helix 15
15
B
66 71Right-handed alpha
Helix 16
16
B
72 74Right-handed 310
Helix 17
17
B
75 85Right-handed alpha
Helix 18
18
B
105 107Right-handed 310
Helix 19
19
B
108 123Right-handed alpha
Helix 20
20
B
141 157Right-handed alpha
Helix 21
21
B
179 195Right-handed alpha
Helix 22
22
B
204 209Right-handed alpha
Helix 23
23
B
210 216Right-handed alpha
Helix 24
24
B
236 248Right-handed alpha
Helix 25
25
B
270 284Right-handed alpha
Helix 26
26
B
314 318Right-handed 310
Helix 27
27
B
319 331Right-handed alpha
Helix 28
28
C
70 74Right-handed 310
Helix 29
29
C
75 86Right-handed alpha
Helix 30
30
C
108 123Right-handed alpha
Helix 31
31
C
141 157Right-handed alpha
Helix 32
32
C
179 193Right-handed alpha
Helix 33
33
C
204 209Right-handed alpha
Helix 34
34
C
210 215Right-handed alpha
Helix 35
35
C
236 249Right-handed alpha
Helix 36
36
C
270 284Right-handed alpha
Helix 37
37
C
314 318Right-handed 310
Helix 38
38
C
319 331Right-handed alpha
Helix 39
39
D
35 40Right-handed alpha
Helix 40
40
D
66 71Right-handed alpha
Helix 41
41
D
72 74Right-handed 310
Helix 42
42
D
75 85Right-handed alpha
Helix 43
43
D
105 107Right-handed 310
Helix 44
44
D
108 121Right-handed alpha
Helix 45
45
D
137 140Right-handed 310
Helix 46
46
D
141 156Right-handed alpha
Helix 47
47
D
179 193Right-handed alpha
Helix 48
48
D
204 209Right-handed alpha
Helix 49
49
D
211 216Right-handed alpha
Helix 50
50
D
236 248Right-handed alpha
Helix 51
51
D
270 284Right-handed alpha
Helix 52
52
D
319 330Right-handed alpha
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There are 9 sheets in PDB entry 3PZV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
48 50anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
90 96parallel
Strand 3
A
125 131parallel
Strand 4
A
162 165parallel
Strand 5
A
200 202parallel
Strand 6
A
224 231parallel
Strand 7
A
253 259parallel
Strand 8
A
288 293parallel
Strand 9
A
60 64parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 45first strand
Strand 2
B
48 50anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
90 96parallel
Strand 3
B
125 131parallel
Strand 4
B
162 165parallel
Strand 5
B
200 202parallel
Strand 6
B
224 231parallel
Strand 7
B
253 259parallel
Strand 8
B
288 293parallel
Strand 9
B
60 64parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 45first strand
Strand 2
C
48 50anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 201first strand
Strand 2
C
162 165parallel
Strand 3
C
125 131parallel
Strand 4
C
90 96parallel
Strand 5
C
60 64parallel
Strand 6
C
288 293parallel
Strand 7
C
253 259parallel
Strand 8
C
226 227parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 201first strand
Strand 2
C
162 165parallel
Strand 3
C
125 131parallel
Strand 4
C
90 96parallel
Strand 5
C
60 64parallel
Strand 6
C
288 293parallel
Strand 7
C
253 259parallel
Strand 8
C
230 231parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
48 50anti-parallel
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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 63first strand
Strand 2
D
91 96parallel
Strand 3
D
126 131parallel
Strand 4
D
162 165parallel
Strand 5
D
199 202parallel
Strand 6
D
224 231parallel
Strand 7
D
253 259parallel
Strand 8
D
288 290parallel
Strand 9
D
60 63parallel
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