Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q0G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3Q0G entry

There are 6 chains in PDB entry 3Q0G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	HIS 256
B	THR 2	PHE 254
C	MET 1	THR 255
D	THR 2	THR 255
E	THR 2	PHE 254
F	THR 2	ILE 98

There are 98 helices in PDB entry 3Q0G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	21	25	Right-handed 310
Helix 2	2	A	29	46	Right-handed alpha
Helix 3	3	A	74	82	Right-handed alpha
Helix 4	4	A	84	86	Right-handed 310
Helix 5	5	A	87	92	Right-handed alpha
Helix 6	6	A	107	116	Right-handed alpha
Helix 7	7	A	129	135	Right-handed 310
Helix 8	8	A	141	151	Right-handed alpha
Helix 9	9	A	151	162	Right-handed alpha
Helix 10	10	A	167	173	Right-handed alpha
Helix 11	11	A	181	183	Right-handed 310
Helix 12	12	A	184	198	Right-handed alpha
Helix 13	13	A	200	213	Right-handed alpha
Helix 14	14	A	214	216	Right-handed 310
Helix 15	15	A	218	234	Right-handed alpha
Helix 16	16	A	238	248	Right-handed alpha
Helix 17	17	B	21	25	Right-handed 310
Helix 18	18	B	29	46	Right-handed alpha
Helix 19	19	B	67	72	Right-handed alpha
Helix 20	20	B	74	82	Right-handed alpha
Helix 21	21	B	84	86	Right-handed 310
Helix 22	22	B	87	92	Right-handed alpha
Helix 23	23	B	107	116	Right-handed alpha
Helix 24	24	B	130	135	Right-handed 310
Helix 25	25	B	141	151	Right-handed alpha
Helix 26	26	B	151	162	Right-handed alpha
Helix 27	27	B	167	173	Right-handed alpha
Helix 28	28	B	181	183	Right-handed 310
Helix 29	29	B	184	198	Right-handed alpha
Helix 30	30	B	200	213	Right-handed alpha
Helix 31	31	B	214	216	Right-handed 310
Helix 32	32	B	218	232	Right-handed alpha
Helix 33	33	B	237	248	Right-handed alpha
Helix 34	34	C	21	25	Right-handed 310
Helix 35	35	C	29	45	Right-handed alpha
Helix 36	36	C	66	72	Right-handed alpha
Helix 37	37	C	74	82	Right-handed alpha
Helix 38	38	C	84	86	Right-handed 310
Helix 39	39	C	87	92	Right-handed alpha
Helix 40	40	C	107	116	Right-handed alpha
Helix 41	41	C	141	151	Right-handed alpha
Helix 42	42	C	151	162	Right-handed alpha
Helix 43	43	C	167	174	Right-handed alpha
Helix 44	44	C	181	183	Right-handed 310
Helix 45	45	C	184	199	Right-handed alpha
Helix 46	46	C	200	214	Right-handed alpha
Helix 47	47	C	218	234	Right-handed alpha
Helix 48	48	C	236	248	Right-handed alpha
Helix 49	49	D	21	25	Right-handed 310
Helix 50	50	D	29	45	Right-handed alpha
Helix 51	51	D	66	70	Right-handed 310
Helix 52	52	D	75	81	Right-handed alpha
Helix 53	53	D	84	86	Right-handed 310
Helix 54	54	D	87	92	Right-handed alpha
Helix 55	55	D	107	115	Right-handed alpha
Helix 56	56	D	130	135	Right-handed 310
Helix 57	57	D	141	151	Right-handed alpha
Helix 58	58	D	151	162	Right-handed alpha
Helix 59	59	D	167	173	Right-handed alpha
Helix 60	60	D	181	183	Right-handed 310
Helix 61	61	D	184	199	Right-handed alpha
Helix 62	62	D	200	214	Right-handed alpha
Helix 63	63	D	218	234	Right-handed alpha
Helix 64	64	D	236	248	Right-handed alpha
Helix 65	65	E	21	25	Right-handed 310
Helix 66	66	E	29	46	Right-handed alpha
Helix 67	67	E	66	70	Right-handed 310
Helix 68	68	E	74	82	Right-handed alpha
Helix 69	69	E	84	86	Right-handed 310
Helix 70	70	E	87	92	Right-handed alpha
Helix 71	71	E	107	116	Right-handed alpha
Helix 72	72	E	130	135	Right-handed 310
Helix 73	73	E	141	151	Right-handed alpha
Helix 74	74	E	151	162	Right-handed alpha
Helix 75	75	E	167	173	Right-handed alpha
Helix 76	76	E	181	183	Right-handed 310
Helix 77	77	E	184	198	Right-handed alpha
Helix 78	78	E	200	214	Right-handed alpha
Helix 79	79	E	218	233	Right-handed alpha
Helix 80	80	E	234	236	Right-handed 310
Helix 81	81	E	237	248	Right-handed alpha
Helix 82	82	F	21	25	Right-handed 310
Helix 83	83	F	29	45	Right-handed alpha
Helix 84	84	F	66	72	Right-handed alpha
Helix 85	85	F	74	82	Right-handed alpha
Helix 86	86	F	84	86	Right-handed 310
Helix 87	87	F	87	92	Right-handed alpha
Helix 88	88	F	107	116	Right-handed alpha
Helix 89	89	F	129	135	Right-handed 310
Helix 90	90	F	141	151	Right-handed alpha
Helix 91	91	F	151	162	Right-handed alpha
Helix 92	92	F	167	173	Right-handed alpha
Helix 93	93	F	181	183	Right-handed 310
Helix 94	94	F	184	199	Right-handed alpha
Helix 95	95	F	200	213	Right-handed alpha
Helix 96	96	F	214	216	Right-handed 310
Helix 97	97	F	218	234	Right-handed alpha
Helix 98	98	F	236	249	Right-handed alpha

There are 12 sheets in PDB entry 3Q0G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	11	first strand
Strand 2	A	14	19	anti-parallel
Strand 3	A	51	55	parallel
Strand 4	A	97	101	parallel
Strand 5	A	118	122	parallel
Strand 6	A	178	180	parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	104	106	parallel
Strand 3	A	126	128	parallel
Strand 4	A	165	166	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	14	19	anti-parallel
Strand 3	B	51	55	parallel
Strand 4	B	97	101	parallel
Strand 5	B	118	122	parallel
Strand 6	B	178	180	parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	63	first strand
Strand 2	B	104	106	parallel
Strand 3	B	126	128	parallel
Strand 4	B	165	166	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	11	first strand
Strand 2	C	14	19	anti-parallel
Strand 3	C	51	55	parallel
Strand 4	C	97	101	parallel
Strand 5	C	118	122	parallel
Strand 6	C	178	180	parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	62	first strand
Strand 2	C	104	106	parallel
Strand 3	C	126	128	parallel
Strand 4	C	164	166	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	11	first strand
Strand 2	D	14	19	anti-parallel
Strand 3	D	51	55	parallel
Strand 4	D	97	101	parallel
Strand 5	D	118	122	parallel
Strand 6	D	178	180	parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	62	first strand
Strand 2	D	104	106	parallel
Strand 3	D	126	128	parallel
Strand 4	D	164	166	anti-parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	14	19	anti-parallel
Strand 3	E	51	55	parallel
Strand 4	E	97	101	parallel
Strand 5	E	118	122	parallel
Strand 6	E	178	180	parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	63	first strand
Strand 2	E	104	106	parallel
Strand 3	E	126	128	parallel
Strand 4	E	165	166	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	11	first strand
Strand 2	F	14	19	anti-parallel
Strand 3	F	51	55	parallel
Strand 4	F	97	101	parallel
Strand 5	F	118	122	parallel
Strand 6	F	178	180	parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	62	first strand
Strand 2	F	104	106	parallel
Strand 3	F	126	128	parallel
Strand 4	F	165	166	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3Q0G

Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q0G