Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q3E entry

There are 2 chains in PDB entry 3Q3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 0GLU 619
B
 GLU 4GLU 619
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 3Q3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 18Right-handed alpha
Helix 2
2
A
20 38Right-handed alpha
Helix 3
3
A
50 54Right-handed 310
Helix 4
4
A
56 78Right-handed alpha
Helix 5
5
A
84 94Right-handed alpha
Helix 6
6
A
94 104Right-handed alpha
Helix 7
7
A
110 115Right-handed alpha
Helix 8
8
A
116 118Right-handed 310
Helix 9
9
A
134 144Right-handed alpha
Helix 10
10
A
154 162Right-handed alpha
Helix 11
11
A
162 175Right-handed alpha
Helix 12
12
A
181 195Right-handed alpha
Helix 13
13
A
195 200Right-handed alpha
Helix 14
14
A
209 211Right-handed 310
Helix 15
15
A
212 220Right-handed alpha
Helix 16
16
A
221 223Right-handed 310
Helix 17
17
A
229 247Right-handed alpha
Helix 18
18
A
277 291Right-handed alpha
Helix 19
19
A
305 310Right-handed alpha
Helix 20
20
A
322 338Right-handed alpha
Helix 21
21
A
350 357Right-handed alpha
Helix 22
22
A
388 390Right-handed 310
Helix 23
23
A
392 396Right-handed 310
Helix 24
24
A
443 457Right-handed alpha
Helix 25
25
A
471 473Right-handed 310
Helix 26
26
A
474 487Right-handed alpha
Helix 27
27
A
497 507Right-handed alpha
Helix 28
28
A
520 529Right-handed alpha
Helix 29
29
A
540 553Right-handed alpha
Helix 30
30
A
556 558Right-handed 310
Helix 31
31
A
563 577Right-handed alpha
Helix 32
32
A
577 591Right-handed alpha
Helix 33
33
A
593 598Right-handed alpha
Helix 34
34
A
603 619Right-handed alpha
Helix 35
35
B
8 18Right-handed alpha
Helix 36
36
B
20 38Right-handed alpha
Helix 37
37
B
50 54Right-handed 310
Helix 38
38
B
56 78Right-handed alpha
Helix 39
39
B
84 94Right-handed alpha
Helix 40
40
B
94 104Right-handed alpha
Helix 41
41
B
110 115Right-handed alpha
Helix 42
42
B
116 118Right-handed 310
Helix 43
43
B
134 145Right-handed alpha
Helix 44
44
B
154 162Right-handed alpha
Helix 45
45
B
162 175Right-handed alpha
Helix 46
46
B
181 195Right-handed alpha
Helix 47
47
B
195 200Right-handed alpha
Helix 48
48
B
209 211Right-handed 310
Helix 49
49
B
212 220Right-handed alpha
Helix 50
50
B
221 223Right-handed 310
Helix 51
51
B
229 248Right-handed alpha
Helix 52
52
B
277 291Right-handed alpha
Helix 53
53
B
305 311Right-handed alpha
Helix 54
54
B
322 338Right-handed alpha
Helix 55
55
B
350 357Right-handed alpha
Helix 56
56
B
388 390Right-handed 310
Helix 57
57
B
392 396Right-handed 310
Helix 58
58
B
440 442Right-handed 310
Helix 59
59
B
443 457Right-handed alpha
Helix 60
60
B
471 473Right-handed 310
Helix 61
61
B
474 487Right-handed alpha
Helix 62
62
B
497 507Right-handed alpha
Helix 63
63
B
520 529Right-handed alpha
Helix 64
64
B
540 554Right-handed alpha
Helix 65
65
B
556 558Right-handed 310
Helix 66
66
B
563 577Right-handed alpha
Helix 67
67
B
577 591Right-handed alpha
Helix 68
68
B
593 598Right-handed 310
Helix 69
69
B
603 618Right-handed alpha
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There are 6 sheets in PDB entry 3Q3E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
263 269anti-parallel
Strand 3
A
295 300parallel
Strand 4
A
314 317parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
263 269anti-parallel
Strand 3
A
341 344parallel
Strand 4
A
364 368parallel
Strand 5
A
382 386parallel
Strand 6
A
399 403parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 493first strand
Strand 2
A
460 467parallel
Strand 3
A
430 437parallel
Strand 4
A
510 512parallel
Strand 5
A
533 536parallel
Strand 6
A
560 561parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 260first strand
Strand 2
B
263 269anti-parallel
Strand 3
B
295 300parallel
Strand 4
B
314 317parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
259 260first strand
Strand 2
B
263 269anti-parallel
Strand 3
B
341 344parallel
Strand 4
B
364 367parallel
Strand 5
B
382 386parallel
Strand 6
B
399 403parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
490 493first strand
Strand 2
B
460 468parallel
Strand 3
B
430 438parallel
Strand 4
B
510 512parallel
Strand 5
B
533 536parallel
Strand 6
B
560 561parallel
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