Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q3Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q3Q entry

There is 1 chain in PDB entry 3Q3Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31CYS 556
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3Q3Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 60Right-handed alpha
Helix 2
2
A
61 63Right-handed 310
Helix 3
3
A
65 74Right-handed alpha
Helix 4
4
A
88 97Right-handed alpha
Helix 5
5
A
101 106Right-handed alpha
Helix 6
6
A
151 160Right-handed alpha
Helix 7
7
A
171 180Right-handed alpha
Helix 8
8
A
204 219Right-handed alpha
Helix 9
9
A
228 235Right-handed 310
Helix 10
10
A
256 262Right-handed alpha
Helix 11
11
A
263 281Right-handed alpha
Helix 12
12
A
297 307Right-handed alpha
Helix 13
13
A
310 334Right-handed alpha
Helix 14
14
A
351 356Right-handed alpha
Helix 15
15
A
367 370Right-handed 310
Helix 16
16
A
371 384Right-handed alpha
Helix 17
17
A
407 425Right-handed alpha
Helix 18
18
A
434 439Right-handed alpha
Helix 19
19
A
446 450Right-handed 310
Helix 20
20
A
451 459Right-handed alpha
Helix 21
21
A
495 499Right-handed alpha
Helix 22
22
A
523 532Right-handed alpha
Helix 23
23
A
537 541Right-handed 310
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There are 6 sheets in PDB entry 3Q3Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 196first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
165 169parallel
Strand 4
A
290 296parallel
Strand 5
A
42 48parallel
Strand 6
A
338 343parallel
Strand 7
A
500 507anti-parallel
Strand 8
A
75 81anti-parallel
Strand 9
A
513 514parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 196first strand
Strand 2
A
185 189anti-parallel
Strand 3
A
165 169parallel
Strand 4
A
290 296parallel
Strand 5
A
42 48parallel
Strand 6
A
338 343parallel
Strand 7
A
500 507anti-parallel
Strand 8
A
75 81anti-parallel
Strand 9
A
519 520parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 113first strand
Strand 2
A
123 125anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 240first strand
Strand 2
A
243 245anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 365first strand
Strand 2
A
476 477parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 393first strand
Strand 2
A
398 402anti-parallel
Strand 3
A
468 472anti-parallel
Strand 4
A
428 433anti-parallel
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