Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q5I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q5I entry

There is 1 chain in PDB entry 3Q5I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29CYS 518
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3Q5I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 34Right-handed 310
Helix 2
2
A
41 46Right-handed 310
Helix 3
3
A
52 55Right-handed 310
Helix 4
4
A
108 121Right-handed alpha
Helix 5
5
A
151 160Right-handed alpha
Helix 6
6
A
163 184Right-handed alpha
Helix 7
7
A
192 194Right-handed 310
Helix 8
8
A
235 240Right-handed alpha
Helix 9
9
A
245 262Right-handed alpha
Helix 10
10
A
270 281Right-handed alpha
Helix 11
11
A
286 291Right-handed alpha
Helix 12
12
A
294 305Right-handed alpha
Helix 13
13
A
314 320Right-handed alpha
Helix 14
14
A
321 327Right-handed alpha
Helix 15
15
A
332 334Right-handed 310
Helix 16
16
A
335 349Right-handed alpha
Helix 17
17
A
353 367Right-handed alpha
Helix 18
18
A
369 384Right-handed alpha
Helix 19
19
A
392 407Right-handed alpha
Helix 20
20
A
415 428Right-handed alpha
Helix 21
21
A
437 445Right-handed alpha
Helix 22
22
A
446 451Right-handed alpha
Helix 23
23
A
452 464Right-handed alpha
Helix 24
24
A
472 480Right-handed alpha
Helix 25
25
A
486 496Right-handed alpha
Helix 26
26
A
507 518Right-handed alpha
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There are 5 sheets in PDB entry 3Q5I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
130 135parallel
Strand 3
A
139 145anti-parallel
Strand 4
A
82 89anti-parallel
Strand 5
A
69 76anti-parallel
Strand 6
A
57 64anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
216 217anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 198first strand
Strand 2
A
207 209anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
435 436anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 471first strand
Strand 2
A
505 506anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il