Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q6C entry

There are 16 chains in PDB entry 3Q6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 38PRO 119
B
 LEU 38PRO 119
C
 LEU 38PRO 119
D
 LEU 38PRO 119
E
 LEU 38PRO 119
F
 LEU 38PRO 119
G
 LEU 38PRO 119
H
 LEU 38PRO 119
I
 LEU 38LEU 120
J
 LEU 38PRO 119
K
 LEU 38PRO 119
L
 LEU 38PRO 119
M
 LEU 38PRO 119
N
 LEU 38PRO 119
O
 LEU 38PRO 119
P
 LEU 38PRO 119
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 3Q6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
90 97Right-handed alpha
Helix 2
2
B
90 97Right-handed alpha
Helix 3
3
C
90 97Right-handed alpha
Helix 4
4
D
90 97Right-handed alpha
Helix 5
5
E
90 97Right-handed alpha
Helix 6
6
F
90 97Right-handed alpha
Helix 7
7
G
90 97Right-handed alpha
Helix 8
8
H
90 97Right-handed alpha
Helix 9
9
I
90 97Right-handed alpha
Helix 10
10
J
90 97Right-handed alpha
Helix 11
11
K
90 97Right-handed alpha
Helix 12
12
L
90 97Right-handed alpha
Helix 13
13
M
90 97Right-handed alpha
Helix 14
14
N
90 97Right-handed alpha
Helix 15
15
O
90 97Right-handed alpha
Helix 16
16
P
90 97Right-handed alpha
Back to top of page

There are 17 sheets in PDB entry 3Q6C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 89first strand
Strand 2
A
70 78anti-parallel
Strand 3
A
39 52anti-parallel
Strand 4
H
39 51anti-parallel
Strand 5
H
71 78anti-parallel
Strand 6
H
85 88anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 117first strand
Strand 2
A
102 108anti-parallel
Strand 3
A
39 52anti-parallel
Strand 4
H
39 51anti-parallel
Strand 5
H
102 108anti-parallel
Strand 6
H
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 89first strand
Strand 2
B
71 78anti-parallel
Strand 3
B
39 51anti-parallel
Strand 4
E
39 51anti-parallel
Strand 5
E
71 78anti-parallel
Strand 6
E
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 117first strand
Strand 2
B
102 108anti-parallel
Strand 3
B
39 51anti-parallel
Strand 4
E
39 51anti-parallel
Strand 5
E
102 108anti-parallel
Strand 6
E
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 89first strand
Strand 2
C
71 78anti-parallel
Strand 3
C
39 51anti-parallel
Strand 4
F
39 51anti-parallel
Strand 5
F
71 78anti-parallel
Strand 6
F
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 117first strand
Strand 2
C
102 108anti-parallel
Strand 3
C
39 51anti-parallel
Strand 4
F
39 51anti-parallel
Strand 5
F
102 108anti-parallel
Strand 6
F
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 117first strand
Strand 2
D
102 108anti-parallel
Strand 3
D
39 51anti-parallel
Strand 4
G
39 51anti-parallel
Strand 5
G
102 108anti-parallel
Strand 6
G
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
85 89first strand
Strand 2
G
71 78anti-parallel
Strand 3
G
39 51anti-parallel
Strand 4
D
39 51anti-parallel
Strand 5
D
71 78anti-parallel
Strand 6
D
85 89anti-parallel
Strand 7
O
54 55parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
85 89first strand
Strand 2
I
70 78anti-parallel
Strand 3
I
39 52anti-parallel
Strand 4
I
102 108anti-parallel
Strand 5
I
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
85 89first strand
Strand 2
I
70 78anti-parallel
Strand 3
I
39 52anti-parallel
Strand 4
J
47 51anti-parallel
Strand 5
J
71 76anti-parallel
Strand 6
J
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
54 55first strand
Strand 2
K
85 89parallel
Strand 3
K
71 78anti-parallel
Strand 4
K
39 51anti-parallel
Strand 5
N
39 52anti-parallel
Strand 6
N
70 77anti-parallel
Strand 7
N
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
111 117first strand
Strand 2
K
102 108anti-parallel
Strand 3
K
39 51anti-parallel
Strand 4
N
39 52anti-parallel
Strand 5
N
102 108anti-parallel
Strand 6
N
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
39 43first strand
Strand 2
J
103 108anti-parallel
Strand 3
J
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
85 89first strand
Strand 2
L
71 78anti-parallel
Strand 3
L
39 51anti-parallel
Strand 4
M
39 51anti-parallel
Strand 5
M
71 78anti-parallel
Strand 6
M
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
111 117first strand
Strand 2
L
102 108anti-parallel
Strand 3
L
39 51anti-parallel
Strand 4
M
39 51anti-parallel
Strand 5
M
102 108anti-parallel
Strand 6
M
111 117anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
85 89first strand
Strand 2
O
70 78anti-parallel
Strand 3
O
39 52anti-parallel
Strand 4
P
39 51anti-parallel
Strand 5
P
71 78anti-parallel
Strand 6
P
85 89anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
111 117first strand
Strand 2
O
102 108anti-parallel
Strand 3
O
39 52anti-parallel
Strand 4
P
39 51anti-parallel
Strand 5
P
102 108anti-parallel
Strand 6
P
111 117anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il