Analysis of interatomic Contacts of Structural Units in PDB entry:
3Q84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3Q84 entry

There are 6 chains in PDB entry 3Q84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16ASP 308
B
 GLU 14TRP 305
G
 THR 16PRO 307
H
 THR 16PRO 307
M
 THR 15GLU 304
N
 THR 15TRP 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 3Q84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 74Right-handed alpha
Helix 2
2
A
78 121Right-handed alpha
Helix 3
3
A
129 175Right-handed alpha
Helix 4
4
A
188 257Right-handed alpha
Helix 5
5
A
258 261Right-handed 310
Helix 6
6
A
262 278Right-handed alpha
Helix 7
7
A
279 292Right-handed alpha
Helix 8
8
B
25 74Right-handed alpha
Helix 9
9
B
77 108Right-handed alpha
Helix 10
10
B
108 121Right-handed alpha
Helix 11
11
B
129 176Right-handed alpha
Helix 12
12
B
186 191Right-handed 310
Helix 13
13
B
192 257Right-handed alpha
Helix 14
14
B
258 260Right-handed 310
Helix 15
15
B
261 278Right-handed alpha
Helix 16
16
B
279 292Right-handed alpha
Helix 17
17
G
25 74Right-handed alpha
Helix 18
18
G
77 108Right-handed alpha
Helix 19
19
G
108 121Right-handed alpha
Helix 20
20
G
129 173Right-handed alpha
Helix 21
21
G
188 257Right-handed alpha
Helix 22
22
G
261 277Right-handed alpha
Helix 23
23
G
279 292Right-handed alpha
Helix 24
24
H
25 74Right-handed alpha
Helix 25
25
H
77 108Right-handed alpha
Helix 26
26
H
108 119Right-handed alpha
Helix 27
27
H
129 180Right-handed alpha
Helix 28
28
H
190 257Right-handed alpha
Helix 29
29
H
258 261Right-handed 310
Helix 30
30
H
262 278Right-handed alpha
Helix 31
31
H
279 292Right-handed alpha
Helix 32
32
M
25 74Right-handed alpha
Helix 33
33
M
78 108Right-handed alpha
Helix 34
34
M
108 121Right-handed alpha
Helix 35
35
M
129 170Right-handed alpha
Helix 36
36
M
191 257Right-handed alpha
Helix 37
37
M
258 260Right-handed 310
Helix 38
38
M
261 277Right-handed alpha
Helix 39
39
M
279 292Right-handed alpha
Helix 40
40
N
25 73Right-handed alpha
Helix 41
41
N
77 108Right-handed alpha
Helix 42
42
N
108 121Right-handed alpha
Helix 43
43
N
129 162Right-handed alpha
Helix 44
44
N
194 257Right-handed alpha
Helix 45
45
N
261 277Right-handed alpha
Helix 46
46
N
279 292Right-handed alpha
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There are no sheets in PDB entry 3Q84
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il