Analysis of interatomic Contacts of Structural Units in PDB entry:
3QCP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QCP entry

There is 1 chain in PDB entry 3QCP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 29ASN 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3QCP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
47 51Right-handed 310
Helix 2
2
A
54 58Right-handed 310
Helix 3
3
A
69 85Right-handed alpha
Helix 4
4
A
93 98Right-handed 310
Helix 5
5
A
108 115Right-handed alpha
Helix 6
6
A
154 170Right-handed alpha
Helix 7
7
A
173 197Right-handed alpha
Helix 8
8
A
215 229Right-handed alpha
Helix 9
9
A
229 235Right-handed alpha
Helix 10
10
A
238 256Right-handed alpha
Helix 11
11
A
260 270Right-handed alpha
Helix 12
12
A
278 289Right-handed alpha
Helix 13
13
A
314 330Right-handed alpha
Helix 14
14
A
335 348Right-handed alpha
Helix 15
15
A
350 358Right-handed alpha
Helix 16
16
A
367 384Right-handed alpha
Helix 17
17
A
418 428Right-handed alpha
Helix 18
18
A
431 436Right-handed alpha
Helix 19
19
A
441 446Right-handed 310
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There are 2 sheets in PDB entry 3QCP. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
99 104parallel
Strand 3
A
60 65parallel
Strand 4
A
122 128anti-parallel
Strand 5
A
143 147anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 296first strand
Strand 2
A
299 300anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il