Analysis of interatomic Contacts of Structural Units in PDB entry:
3QE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QE7 entry

There is 1 chain in PDB entry 3QE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 4SER 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 3QE7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 38Right-handed alpha
Helix 2
2
A
42 61Right-handed alpha
Helix 3
3
A
75 83Right-handed alpha
Helix 4
4
A
86 110Right-handed alpha
Helix 5
5
A
113 120Right-handed alpha
Helix 6
6
A
121 144Right-handed alpha
Helix 7
7
A
155 175Right-handed alpha
Helix 8
8
A
182 202Right-handed alpha
Helix 9
9
A
205 210Right-handed alpha
Helix 10
10
A
224 232Right-handed alpha
Helix 11
11
A
232 254Right-handed alpha
Helix 12
12
A
262 281Right-handed alpha
Helix 13
13
A
288 299Right-handed alpha
Helix 14
14
A
302 317Right-handed alpha
Helix 15
15
A
319 327Right-handed alpha
Helix 16
16
A
330 356Right-handed alpha
Helix 17
17
A
362 379Right-handed alpha
Helix 18
18
A
390 407Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3QE7.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 71first strand
Strand 2
A
285 287anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il