Analysis of interatomic Contacts of Structural Units in PDB entry:
3QM0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QM0 entry

There are 2 chains in PDB entry 3QM0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0PRO 289
A
 ALA 291HIS 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3QM0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 9Right-handed alpha
Helix 2
2
A
99 113Right-handed alpha
Helix 3
3
A
116 123Right-handed alpha
Helix 4
4
A
181 185Right-handed 310
Helix 5
5
A
214 234Right-handed alpha
Helix 6
6
A
248 257Right-handed alpha
Helix 7
7
A
277 281Right-handed 310
Helix 8
8
A
288 300Right-handed alpha
Helix 9
9
A
307 316Right-handed alpha
Helix 10
10
A
354 367Right-handed alpha
Helix 11
11
A
372 391Right-handed alpha
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There are 2 sheets in PDB entry 3QM0. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
45 57anti-parallel
Strand 3
A
61 73anti-parallel
Strand 4
A
79 90anti-parallel
Strand 5
A
186 193parallel
Strand 6
A
328 334anti-parallel
Strand 7
A
239 243anti-parallel
Strand 8
A
264 266parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
45 57anti-parallel
Strand 3
A
16 23anti-parallel
Strand 4
A
396 399anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il