Analysis of interatomic Contacts of Structural Units in PDB entry:
3QMZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3QMZ entry

There are 4 chains in PDB entry 3QMZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 1364	MET 4092
B	GLU 1364	MET 4092
T	SER 1	PRO 216
S	SER 1	PRO 216

There are204 helices in PDB entry 3QMZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	1365	1380	Right-handed alpha
Helix 2	2	A	1400	1417	Right-handed alpha
Helix 3	3	A	1430	1446	Right-handed alpha
Helix 4	4	A	1449	1465	Right-handed alpha
Helix 5	5	A	1473	1493	Right-handed alpha
Helix 6	6	A	1502	1531	Right-handed alpha
Helix 7	7	A	1544	1549	Right-handed alpha
Helix 8	8	A	1553	1567	Right-handed alpha
Helix 9	9	A	1605	1632	Right-handed alpha
Helix 10	10	A	1637	1643	Right-handed alpha
Helix 11	11	A	1646	1662	Right-handed alpha
Helix 12	12	A	1672	1688	Right-handed alpha
Helix 13	13	A	1694	1713	Right-handed alpha
Helix 14	14	A	1726	1734	Right-handed alpha
Helix 15	15	A	1777	1787	Right-handed alpha
Helix 16	16	A	1802	1810	Right-handed alpha
Helix 17	17	A	1829	1841	Right-handed alpha
Helix 18	18	A	1856	1872	Right-handed alpha
Helix 19	19	A	1910	1914	Right-handed alpha
Helix 20	20	A	1926	1939	Right-handed alpha
Helix 21	21	A	1943	1959	Right-handed alpha
Helix 22	22	A	1970	1983	Right-handed alpha
Helix 23	23	A	1992	2000	Right-handed alpha
Helix 24	24	A	2008	2019	Right-handed alpha
Helix 25	25	A	2032	2041	Right-handed alpha
Helix 26	26	A	2052	2064	Right-handed alpha
Helix 27	27	A	2080	2094	Right-handed alpha
Helix 28	28	A	2130	2139	Right-handed alpha
Helix 29	29	A	2160	2168	Right-handed alpha
Helix 30	30	A	2200	2208	Right-handed alpha
Helix 31	31	A	2224	2238	Right-handed alpha
Helix 32	32	A	2244	2252	Right-handed alpha
Helix 33	33	A	2257	2269	Right-handed alpha
Helix 34	34	A	2280	2301	Right-handed alpha
Helix 35	35	A	2310	2327	Right-handed alpha
Helix 36	36	A	2332	2344	Right-handed alpha
Helix 37	37	A	2349	2354	Right-handed alpha
Helix 38	38	A	2384	2390	Right-handed alpha
Helix 39	39	A	2396	2406	Right-handed alpha
Helix 40	40	A	2421	2431	Right-handed alpha
Helix 41	41	A	2449	2459	Right-handed alpha
Helix 42	42	A	2503	2510	Right-handed alpha
Helix 43	43	A	2545	2551	Right-handed alpha
Helix 44	44	A	2563	2574	Right-handed alpha
Helix 45	45	A	2583	2606	Right-handed alpha
Helix 46	46	A	2610	2614	Right-handed alpha
Helix 47	47	A	2617	2632	Right-handed alpha
Helix 48	48	A	2641	2655	Right-handed alpha
Helix 49	49	A	2665	2675	Right-handed alpha
Helix 50	50	A	2710	2723	Right-handed alpha
Helix 51	51	A	2736	2748	Right-handed alpha
Helix 52	52	A	2762	2774	Right-handed alpha
Helix 53	53	A	2792	2807	Right-handed alpha
Helix 54	54	A	2824	2836	Right-handed alpha
Helix 55	55	A	2848	2860	Right-handed alpha
Helix 56	56	A	2872	2883	Right-handed alpha
Helix 57	57	A	2898	2909	Right-handed alpha
Helix 58	58	A	2923	2934	Right-handed alpha
Helix 59	59	A	2946	2961	Right-handed alpha
Helix 60	60	A	2990	3027	Right-handed alpha
Helix 61	61	A	3290	3333	Right-handed alpha
Helix 62	62	A	3339	3350	Right-handed alpha
Helix 63	63	A	3364	3368	Right-handed alpha
Helix 64	64	A	3371	3380	Right-handed alpha
Helix 65	65	A	3390	3399	Right-handed alpha
Helix 66	66	A	3411	3419	Right-handed alpha
Helix 67	67	A	3436	3445	Right-handed alpha
Helix 68	68	A	3458	3469	Right-handed alpha
Helix 69	69	A	3503	3511	Right-handed alpha
Helix 70	70	A	3525	3535	Right-handed alpha
Helix 71	71	A	3537	3548	Right-handed alpha
Helix 72	72	A	3550	3571	Right-handed alpha
Helix 73	73	A	3582	3608	Right-handed alpha
Helix 74	74	A	3612	3635	Right-handed alpha
Helix 75	75	A	3645	3658	Right-handed alpha
Helix 76	76	A	3668	3680	Right-handed alpha
Helix 77	77	A	3689	3698	Right-handed alpha
Helix 78	78	A	3700	3708	Right-handed alpha
Helix 79	79	A	3740	3750	Right-handed alpha
Helix 80	80	A	3755	3762	Right-handed alpha
Helix 81	81	A	3773	3781	Right-handed alpha
Helix 82	82	A	3797	3805	Right-handed alpha
Helix 83	83	A	3823	3834	Right-handed alpha
Helix 84	84	A	3849	3859	Right-handed alpha
Helix 85	85	A	3886	3890	Right-handed alpha
Helix 86	86	A	3905	3915	Right-handed alpha
Helix 87	87	A	3924	3941	Right-handed alpha
Helix 88	88	A	3959	3972	Right-handed alpha
Helix 89	89	A	3983	3995	Right-handed alpha
Helix 90	90	A	4003	4013	Right-handed alpha
Helix 91	91	A	4020	4027	Right-handed alpha
Helix 92	92	A	4037	4047	Right-handed alpha
Helix 93	93	A	4059	4064	Right-handed alpha
Helix 94	94	A	4070	4091	Right-handed alpha
Helix 95	95	B	1365	1380	Right-handed alpha
Helix 96	2	B	1400	1417	Right-handed alpha
Helix 97	97	B	1430	1446	Right-handed alpha
Helix 98	98	B	1449	1465	Right-handed alpha
Helix 99	99	B	1473	1493	Right-handed alpha
Helix 100	100	B	1502	1531	Right-handed alpha
Helix 101	101	B	1544	1549	Right-handed alpha
Helix 102	102	B	1553	1567	Right-handed alpha
Helix 103	103	B	1605	1632	Right-handed alpha
Helix 104	104	B	1637	1643	Right-handed alpha
Helix 105	105	B	1646	1662	Right-handed alpha
Helix 106	106	B	1672	1688	Right-handed alpha
Helix 107	107	B	1694	1713	Right-handed alpha
Helix 108	108	B	1726	1734	Right-handed alpha
Helix 109	109	B	1777	1787	Right-handed alpha
Helix 110	110	B	1802	1810	Right-handed alpha
Helix 111	111	B	1829	1841	Right-handed alpha
Helix 112	112	B	1856	1872	Right-handed alpha
Helix 113	113	B	1910	1914	Right-handed alpha
Helix 114	114	B	1926	1939	Right-handed alpha
Helix 115	115	B	1943	1959	Right-handed alpha
Helix 116	116	B	1970	1983	Right-handed alpha
Helix 117	117	B	1992	2000	Right-handed alpha
Helix 118	118	B	2008	2019	Right-handed alpha
Helix 119	119	B	2032	2041	Right-handed alpha
Helix 120	120	B	2052	2064	Right-handed alpha
Helix 121	121	B	2080	2094	Right-handed alpha
Helix 122	122	B	2130	2139	Right-handed alpha
Helix 123	123	B	2160	2168	Right-handed alpha
Helix 124	124	B	2200	2208	Right-handed alpha
Helix 125	125	B	2224	2238	Right-handed alpha
Helix 126	126	B	2244	2252	Right-handed alpha
Helix 127	127	B	2257	2269	Right-handed alpha
Helix 128	128	B	2280	2301	Right-handed alpha
Helix 129	129	B	2310	2327	Right-handed alpha
Helix 130	130	B	2332	2344	Right-handed alpha
Helix 131	131	B	2349	2354	Right-handed alpha
Helix 132	132	B	2384	2390	Right-handed alpha
Helix 133	133	B	2396	2406	Right-handed alpha
Helix 134	134	B	2421	2431	Right-handed alpha
Helix 135	135	B	2449	2459	Right-handed alpha
Helix 136	136	B	2503	2510	Right-handed alpha
Helix 137	137	B	2545	2551	Right-handed alpha
Helix 138	138	B	2563	2574	Right-handed alpha
Helix 139	139	B	2583	2606	Right-handed alpha
Helix 140	140	B	2610	2614	Right-handed alpha
Helix 141	141	B	2617	2632	Right-handed alpha
Helix 142	142	B	2641	2655	Right-handed alpha
Helix 143	143	B	2665	2675	Right-handed alpha
Helix 144	144	B	2710	2723	Right-handed alpha
Helix 145	145	B	2736	2748	Right-handed alpha
Helix 146	146	B	2762	2774	Right-handed alpha
Helix 147	147	B	2792	2807	Right-handed alpha
Helix 148	148	B	2824	2836	Right-handed alpha
Helix 149	149	B	2848	2860	Right-handed alpha
Helix 150	150	B	2872	2883	Right-handed alpha
Helix 151	151	B	2898	2909	Right-handed alpha
Helix 152	152	B	2923	2934	Right-handed alpha
Helix 153	153	B	2946	2961	Right-handed alpha
Helix 154	154	B	2990	3027	Right-handed alpha
Helix 155	155	B	3290	3333	Right-handed alpha
Helix 156	156	B	3339	3350	Right-handed alpha
Helix 157	157	B	3364	3368	Right-handed alpha
Helix 158	158	B	3371	3380	Right-handed alpha
Helix 159	159	B	3390	3399	Right-handed alpha
Helix 160	160	B	3411	3419	Right-handed alpha
Helix 161	161	B	3436	3445	Right-handed alpha
Helix 162	162	B	3458	3469	Right-handed alpha
Helix 163	163	B	3503	3511	Right-handed alpha
Helix 164	164	B	3525	3535	Right-handed alpha
Helix 165	165	B	3537	3548	Right-handed alpha
Helix 166	166	B	3550	3571	Right-handed alpha
Helix 167	167	B	3582	3608	Right-handed alpha
Helix 168	168	B	3612	3635	Right-handed alpha
Helix 169	169	B	3645	3658	Right-handed alpha
Helix 170	170	B	3668	3680	Right-handed alpha
Helix 171	171	B	3689	3698	Right-handed alpha
Helix 172	172	B	3700	3708	Right-handed alpha
Helix 173	173	B	3740	3750	Right-handed alpha
Helix 174	174	B	3755	3762	Right-handed alpha
Helix 175	175	B	3773	3781	Right-handed alpha
Helix 176	176	B	3797	3805	Right-handed alpha
Helix 177	177	B	3823	3834	Right-handed alpha
Helix 178	178	B	3849	3859	Right-handed alpha
Helix 179	179	B	3886	3890	Right-handed alpha
Helix 180	180	B	3905	3915	Right-handed alpha
Helix 181	181	B	3924	3941	Right-handed alpha
Helix 182	182	B	3959	3972	Right-handed alpha
Helix 183	183	B	3983	3995	Right-handed alpha
Helix 184	184	B	4003	4013	Right-handed alpha
Helix 185	185	B	4020	4027	Right-handed alpha
Helix 186	186	B	4037	4047	Right-handed alpha
Helix 187	187	B	4059	4064	Right-handed alpha
Helix 188	188	B	4070	4091	Right-handed alpha
Helix 189	189	T	14	23	Right-handed alpha
Helix 190	190	T	37	44	Right-handed alpha
Helix 191	191	T	67	78	Right-handed alpha
Helix 192	192	T	85	106	Right-handed alpha
Helix 193	193	T	114	135	Right-handed alpha
Helix 194	194	T	149	164	Right-handed alpha
Helix 195	195	T	173	184	Right-handed alpha
Helix 196	196	T	186	192	Right-handed alpha
Helix 197	197	S	14	23	Right-handed alpha
Helix 198	198	S	37	44	Right-handed alpha
Helix 199	199	S	67	78	Right-handed alpha
Helix 200	200	S	85	106	Right-handed alpha
Helix 201	201	S	114	135	Right-handed alpha
Helix 202	202	S	149	164	Right-handed alpha
Helix 203	203	S	173	184	Right-handed alpha
Helix 204	204	S	186	192	Right-handed alpha

There are 24 sheets in PDB entry 3QMZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1389	1391	first strand
Strand 2	A	1394	1396	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1578	1580	first strand
Strand 2	A	1583	1585	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1746	1747	first strand
Strand 2	A	1752	1753	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1819	1820	first strand
Strand 2	A	1846	1847	parallel
Strand 3	A	1895	1898	parallel
Strand 4	A	1792	1795	parallel
Strand 5	A	1918	1920	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2070	2074	first strand
Strand 2	A	2211	2215	parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2101	2103	first strand
Strand 2	A	2150	2153	parallel
Strand 3	A	2191	2193	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2438	2440	first strand
Strand 2	A	2480	2484	parallel
Strand 3	A	2527	2532	parallel
Strand 4	A	2411	2414	parallel
Strand 5	A	2554	2555	parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2779	2782	first strand
Strand 2	A	2813	2817	parallel
Strand 3	A	2886	2891	parallel
Strand 4	A	2754	2757	parallel
Strand 5	A	2914	2915	parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3427	3429	first strand
Strand 2	A	3450	3452	parallel
Strand 3	A	3494	3495	parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3476	3478	first strand
Strand 2	A	3483	3485	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3812	3814	first strand
Strand 2	A	3839	3841	parallel
Strand 3	A	3873	3876	parallel
Strand 4	A	3785	3788	parallel
Strand 5	A	3894	3897	parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1389	1391	first strand
Strand 2	B	1394	1396	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1578	1580	first strand
Strand 2	B	1583	1585	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1746	1747	first strand
Strand 2	B	1752	1753	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1819	1820	first strand
Strand 2	B	1846	1847	parallel
Strand 3	B	1895	1898	parallel
Strand 4	B	1792	1795	parallel
Strand 5	B	1918	1920	parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2070	2074	first strand
Strand 2	B	2211	2215	parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2101	2103	first strand
Strand 2	B	2150	2153	parallel
Strand 3	B	2191	2193	parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2438	2440	first strand
Strand 2	B	2480	2484	parallel
Strand 3	B	2527	2532	parallel
Strand 4	B	2411	2414	parallel
Strand 5	B	2554	2555	parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2779	2782	first strand
Strand 2	B	2813	2817	parallel
Strand 3	B	2886	2891	parallel
Strand 4	B	2754	2757	parallel
Strand 5	B	2914	2915	parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3427	3429	first strand
Strand 2	B	3450	3452	parallel
Strand 3	B	3494	3495	parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3476	3478	first strand
Strand 2	B	3483	3485	anti-parallel

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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3812	3814	first strand
Strand 2	B	3839	3841	parallel
Strand 3	B	3873	3876	parallel
Strand 4	B	3785	3788	parallel
Strand 5	B	3894	3897	parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	28	32	first strand
Strand 2	T	3	7	parallel
Strand 3	T	56	58	anti-parallel
Strand 4	T	63	65	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	28	32	first strand
Strand 2	S	3	7	parallel
Strand 3	S	56	58	anti-parallel
Strand 4	S	63	65	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3QMZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3QMZ