Analysis of interatomic Contacts of Structural Units in PDB entry:
3QQV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QQV entry

There is 1 chain in PDB entry 3QQV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 16ARG 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3QQV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 44Right-handed alpha
Helix 2
2
A
44 60Right-handed alpha
Helix 3
3
A
64 77Right-handed alpha
Helix 4
4
A
78 83Right-handed alpha
Helix 5
5
A
86 96Right-handed alpha
Helix 6
6
A
96 112Right-handed alpha
Helix 7
7
A
122 129Right-handed alpha
Helix 8
8
A
129 135Right-handed alpha
Helix 9
9
A
139 165Right-handed alpha
Helix 10
10
A
169 200Right-handed alpha
Helix 11
11
A
204 216Right-handed alpha
Helix 12
12
A
216 221Right-handed alpha
Helix 13
13
A
221 232Right-handed alpha
Helix 14
14
A
235 264Right-handed alpha
Helix 15
15
A
265 270Right-handed alpha
Helix 16
16
A
274 280Right-handed alpha
Helix 17
17
A
283 295Right-handed alpha
Helix 18
18
A
297 308Right-handed alpha
Helix 19
19
A
313 327Right-handed alpha
Helix 20
20
A
328 347Right-handed alpha
Helix 21
21
A
348 350Right-handed 310
Helix 22
22
A
354 370Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3QQV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
120 121anti-parallel
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