Analysis of interatomic Contacts of Structural Units in PDB entry:
3QR0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QR0 entry

There is 1 chain in PDB entry 3QR0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 11LYS 816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3QR0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 25Right-handed alpha
Helix 2
2
A
77 79Right-handed 310
Helix 3
3
A
84 94Right-handed alpha
Helix 4
4
A
100 104Right-handed alpha
Helix 5
5
A
126 142Right-handed alpha
Helix 6
6
A
143 148Right-handed alpha
Helix 7
7
A
150 165Right-handed alpha
Helix 8
8
A
174 182Right-handed alpha
Helix 9
9
A
184 199Right-handed alpha
Helix 10
10
A
214 226Right-handed alpha
Helix 11
11
A
229 239Right-handed alpha
Helix 12
12
A
247 257Right-handed alpha
Helix 13
13
A
272 289Right-handed alpha
Helix 14
14
A
290 292Right-handed 310
Helix 15
15
A
298 308Right-handed alpha
Helix 16
16
A
309 312Right-handed 310
Helix 17
17
A
315 320Right-handed alpha
Helix 18
18
A
328 330Right-handed 310
Helix 19
19
A
353 362Right-handed alpha
Helix 20
20
A
393 404Right-handed alpha
Helix 21
21
A
421 437Right-handed alpha
Helix 22
22
A
438 440Right-handed 310
Helix 23
23
A
487 502Right-handed alpha
Helix 24
24
A
503 506Right-handed 310
Helix 25
25
A
511 516Right-handed alpha
Helix 26
26
A
528 536Right-handed alpha
Helix 27
27
A
546 556Right-handed alpha
Helix 28
28
A
556 564Right-handed alpha
Helix 29
29
A
585 590Right-handed alpha
Helix 30
30
A
604 614Right-handed alpha
Helix 31
31
A
626 631Right-handed alpha
Helix 32
32
A
678 682Right-handed 310
Helix 33
33
A
713 716Right-handed 310
Helix 34
34
A
792 801Right-handed alpha
Helix 35
35
A
802 805Right-handed 310
Helix 36
36
A
807 816Right-handed alpha
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There are 8 sheets in PDB entry 3QR0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
51 54anti-parallel
Strand 3
A
39 45anti-parallel
Strand 4
A
26 31anti-parallel
Strand 5
A
118 124anti-parallel
Strand 6
A
105 110anti-parallel
Strand 7
A
70 75anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
207 209anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 246first strand
Strand 2
A
296 297anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 334first strand
Strand 2
A
622 624anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
391 392first strand
Strand 2
A
380 381anti-parallel
Strand 3
A
366 372anti-parallel
Strand 4
A
412 418parallel
Strand 5
A
466 469parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 523first strand
Strand 2
A
540 545parallel
Strand 3
A
569 572parallel
Strand 4
A
595 596parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
706 711first strand
Strand 2
A
650 660anti-parallel
Strand 3
A
757 771anti-parallel
Strand 4
A
744 751anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
683 688first strand
Strand 2
A
669 676anti-parallel
Strand 3
A
718 725anti-parallel
Strand 4
A
730 737anti-parallel
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