Analysis of interatomic Contacts of Structural Units in PDB entry:
3QR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QR5 entry

There are 2 chains in PDB entry 3QR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 12ILE 217
B
 GLN 12ILE 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3QR5

There are 6 sheets in PDB entry 3QR5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
32 39anti-parallel
Strand 3
A
19 27anti-parallel
Strand 4
A
97 101anti-parallel
Strand 5
A
118 123anti-parallel
Strand 6
A
159 164anti-parallel
Strand 7
A
181 185anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
32 39anti-parallel
Strand 3
A
19 27anti-parallel
Strand 4
A
213 216anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
145 150anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
191 195anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
20 27anti-parallel
Strand 4
B
97 101anti-parallel
Strand 5
B
118 123anti-parallel
Strand 6
B
159 164anti-parallel
Strand 7
B
181 185anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 48first strand
Strand 2
B
32 38anti-parallel
Strand 3
B
20 27anti-parallel
Strand 4
B
213 216anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
145 150anti-parallel
Strand 3
B
200 206anti-parallel
Strand 4
B
191 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il