Analysis of interatomic Contacts of Structural Units in PDB entry:
3QT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QT2 entry

There are 6 chains in PDB entry 3QT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 7PHE 313
C
 THR 3ILE 112
D
 PRO 6GLU 114
B
 ILE 8SER 314
E
 GLU 4ILE 112
F
 PRO 6GLU 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 3QT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
104 108Right-handed 310
Helix 2
2
A
213 217Right-handed alpha
Helix 3
3
A
246 248Right-handed 310
Helix 4
4
C
9 27Right-handed alpha
Helix 5
5
C
40 59Right-handed alpha
Helix 6
6
C
62 85Right-handed alpha
Helix 7
7
C
93 111Right-handed alpha
Helix 8
8
D
7 21Right-handed alpha
Helix 9
9
D
21 26Right-handed alpha
Helix 10
10
D
40 43Right-handed 310
Helix 11
11
D
44 57Right-handed alpha
Helix 12
12
D
64 86Right-handed alpha
Helix 13
13
D
92 110Right-handed alpha
Helix 14
14
B
104 108Right-handed 310
Helix 15
15
B
212 217Right-handed alpha
Helix 16
16
B
246 248Right-handed 310
Helix 17
17
E
6 21Right-handed alpha
Helix 18
18
E
21 27Right-handed alpha
Helix 19
19
E
40 43Right-handed 310
Helix 20
20
E
44 58Right-handed alpha
Helix 21
21
E
65 86Right-handed alpha
Helix 22
22
E
93 111Right-handed alpha
Helix 23
23
F
7 21Right-handed alpha
Helix 24
24
F
21 27Right-handed alpha
Helix 25
25
F
40 43Right-handed 310
Helix 26
26
F
44 57Right-handed alpha
Helix 27
27
F
64 86Right-handed alpha
Helix 28
28
F
92 111Right-handed alpha
Back to top of page

There are 15 sheets in PDB entry 3QT2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 22first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
63 67anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
74 83anti-parallel
Strand 3
A
94 98anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
74 83anti-parallel
Strand 3
A
44 51anti-parallel
Strand 4
A
55 59anti-parallel
Strand 5
C
89 92anti-parallel
Strand 6
D
32 34anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 120first strand
Strand 2
A
129 138anti-parallel
Strand 3
A
173 178anti-parallel
Strand 4
A
165 167anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
148 155anti-parallel
Strand 3
A
190 198anti-parallel
Strand 4
A
207 212anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 230first strand
Strand 2
A
233 239anti-parallel
Strand 3
A
273 277anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 269first strand
Strand 2
A
250 258anti-parallel
Strand 3
A
284 292anti-parallel
Strand 4
A
309 311anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 22first strand
Strand 2
B
25 31anti-parallel
Strand 3
B
63 67anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
74 82anti-parallel
Strand 3
B
94 98anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
74 82anti-parallel
Strand 3
B
44 51anti-parallel
Strand 4
B
55 59anti-parallel
Strand 5
E
89 92anti-parallel
Strand 6
F
32 34anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 120first strand
Strand 2
B
129 138anti-parallel
Strand 3
B
173 178anti-parallel
Strand 4
B
164 167anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 161first strand
Strand 2
B
148 155anti-parallel
Strand 3
B
191 198anti-parallel
Strand 4
B
207 211anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 230first strand
Strand 2
B
233 239anti-parallel
Strand 3
B
273 277anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 269first strand
Strand 2
B
250 258anti-parallel
Strand 3
B
284 292anti-parallel
Strand 4
B
309 311anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
33 34first strand
Strand 2
F
90 91anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il