Analysis of interatomic Contacts of Structural Units in PDB entry:
3QTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QTY entry

There are 2 chains in PDB entry 3QTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ILE 347
B
 GLN 18ILE 347
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3QTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 29Right-handed alpha
Helix 2
2
A
48 55Right-handed alpha
Helix 3
3
A
69 78Right-handed alpha
Helix 4
4
A
82 97Right-handed alpha
Helix 5
5
A
115 133Right-handed alpha
Helix 6
6
A
167 169Right-handed 310
Helix 7
7
A
193 203Right-handed alpha
Helix 8
8
A
213 217Right-handed 310
Helix 9
9
A
220 227Right-handed alpha
Helix 10
10
A
232 242Right-handed alpha
Helix 11
11
A
255 261Right-handed alpha
Helix 12
12
A
262 265Right-handed 310
Helix 13
13
A
275 278Right-handed 310
Helix 14
14
A
281 291Right-handed alpha
Helix 15
15
A
294 302Right-handed alpha
Helix 16
16
A
313 315Right-handed 310
Helix 17
17
A
316 325Right-handed alpha
Helix 18
18
B
18 29Right-handed alpha
Helix 19
19
B
48 55Right-handed alpha
Helix 20
20
B
69 78Right-handed alpha
Helix 21
21
B
82 97Right-handed alpha
Helix 22
22
B
115 133Right-handed alpha
Helix 23
23
B
167 169Right-handed 310
Helix 24
24
B
193 203Right-handed alpha
Helix 25
25
B
213 217Right-handed 310
Helix 26
26
B
220 226Right-handed alpha
Helix 27
27
B
232 242Right-handed alpha
Helix 28
28
B
255 261Right-handed alpha
Helix 29
29
B
262 265Right-handed 310
Helix 30
30
B
276 278Right-handed 310
Helix 31
31
B
281 291Right-handed alpha
Helix 32
32
B
294 302Right-handed alpha
Helix 33
33
B
313 315Right-handed 310
Helix 34
34
B
316 325Right-handed alpha
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There are 4 sheets in PDB entry 3QTY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
A
44 47anti-parallel
Strand 3
B
58 66anti-parallel
Strand 4
B
154 165anti-parallel
Strand 5
B
101 111anti-parallel
Strand 6
B
136 144parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 144first strand
Strand 2
A
101 111parallel
Strand 3
A
154 165anti-parallel
Strand 4
A
58 66anti-parallel
Strand 5
B
44 47anti-parallel
Strand 6
B
35 37anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 251first strand
Strand 2
A
306 312anti-parallel
Strand 3
A
180 185anti-parallel
Strand 4
A
332 339anti-parallel
Strand 5
A
270 273anti-parallel
Strand 6
A
344 346parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 251first strand
Strand 2
B
306 312anti-parallel
Strand 3
B
180 185anti-parallel
Strand 4
B
332 339anti-parallel
Strand 5
B
270 274anti-parallel
Strand 6
B
344 347parallel
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