Analysis of interatomic Contacts of Structural Units in PDB entry:
3QVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QVO entry

There is 1 chain in PDB entry 3QVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0MSE 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3QVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 22Right-handed alpha
Helix 2
2
A
35 39Right-handed 310
Helix 3
3
A
56 65Right-handed alpha
Helix 4
4
A
78 93Right-handed alpha
Helix 5
5
A
123 125Right-handed 310
Helix 6
6
A
126 138Right-handed alpha
Helix 7
7
A
175 188Right-handed alpha
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There are 2 sheets in PDB entry 3QVO. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
27 33parallel
Strand 3
A
2 7parallel
Strand 4
A
69 73parallel
Strand 5
A
97 101parallel
Strand 6
A
142 148parallel
Strand 7
A
195 200parallel
Strand 8
A
160 162anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
172 174parallel
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