Analysis of interatomic Contacts of Structural Units in PDB entry:
3QWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QWM entry

There is 1 chain in PDB entry 3QWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
HIS 736GLN 865
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 3QWM. Click on helix number for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
832 865Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3QWM.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
789 792first strand
Strand 2
A
771 775anti-parallel
Strand 3
A
761 767anti-parallel
Strand 4
A
739 747anti-parallel
Strand 5
A
823 829anti-parallel
Strand 6
A
810 815anti-parallel
Strand 7
A
797 802anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il