Analysis of interatomic Contacts of Structural Units in PDB entry:
3QWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QWT entry

There are 4 chains in PDB entry 3QWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PHE 378
B
 MSE 1PHE 378
C
 MSE 1PHE 378
D
 MSE 1ARG 86
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 3QWT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 35Right-handed alpha
Helix 2
2
A
63 81Right-handed alpha
Helix 3
3
A
82 100Right-handed alpha
Helix 4
4
A
110 123Right-handed alpha
Helix 5
5
A
124 126Right-handed 310
Helix 6
6
A
127 141Right-handed alpha
Helix 7
7
A
145 149Right-handed 310
Helix 8
8
A
166 171Right-handed alpha
Helix 9
9
A
171 182Right-handed alpha
Helix 10
10
A
184 203Right-handed alpha
Helix 11
11
A
227 246Right-handed alpha
Helix 12
12
A
251 270Right-handed alpha
Helix 13
13
A
290 307Right-handed alpha
Helix 14
14
A
311 313Right-handed 310
Helix 15
15
A
314 328Right-handed alpha
Helix 16
16
A
347 353Right-handed alpha
Helix 17
17
A
359 375Right-handed alpha
Helix 18
18
A
376 378Right-handed 310
Helix 19
19
B
19 35Right-handed alpha
Helix 20
20
B
63 81Right-handed alpha
Helix 21
21
B
82 100Right-handed alpha
Helix 22
22
B
110 123Right-handed alpha
Helix 23
23
B
127 141Right-handed alpha
Helix 24
24
B
145 149Right-handed 310
Helix 25
25
B
166 171Right-handed alpha
Helix 26
26
B
171 182Right-handed alpha
Helix 27
27
B
184 203Right-handed alpha
Helix 28
28
B
227 246Right-handed alpha
Helix 29
29
B
251 272Right-handed alpha
Helix 30
30
B
291 307Right-handed alpha
Helix 31
31
B
311 313Right-handed 310
Helix 32
32
B
314 328Right-handed alpha
Helix 33
33
B
347 352Right-handed alpha
Helix 34
34
B
359 374Right-handed alpha
Helix 35
35
B
375 378Right-handed 310
Helix 36
36
C
19 36Right-handed alpha
Helix 37
37
C
63 81Right-handed alpha
Helix 38
38
C
82 100Right-handed alpha
Helix 39
39
C
110 123Right-handed alpha
Helix 40
40
C
127 141Right-handed alpha
Helix 41
41
C
146 148Right-handed 310
Helix 42
42
C
166 171Right-handed alpha
Helix 43
43
C
171 182Right-handed alpha
Helix 44
44
C
184 203Right-handed alpha
Helix 45
45
C
227 246Right-handed alpha
Helix 46
46
C
251 271Right-handed alpha
Helix 47
47
C
291 307Right-handed alpha
Helix 48
48
C
311 313Right-handed 310
Helix 49
49
C
314 328Right-handed alpha
Helix 50
50
C
348 353Right-handed alpha
Helix 51
51
C
359 374Right-handed alpha
Helix 52
52
C
375 378Right-handed 310
Helix 53
53
D
19 36Right-handed alpha
Helix 54
54
D
63 81Right-handed alpha
Helix 55
55
D
82 100Right-handed alpha
Helix 56
56
D
111 123Right-handed alpha
Helix 57
57
D
124 126Right-handed 310
Helix 58
58
D
127 141Right-handed alpha
Helix 59
59
D
145 149Right-handed 310
Helix 60
60
D
166 171Right-handed alpha
Helix 61
61
D
171 182Right-handed alpha
Helix 62
62
D
184 203Right-handed alpha
Helix 63
63
D
227 246Right-handed alpha
Helix 64
64
D
251 272Right-handed alpha
Helix 65
65
D
291 307Right-handed alpha
Helix 66
66
D
311 313Right-handed 310
Helix 67
67
D
314 328Right-handed alpha
Helix 68
68
D
347 353Right-handed alpha
Helix 69
69
D
359 375Right-handed alpha
Helix 70
70
D
376 378Right-handed 310
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There are 12 sheets in PDB entry 3QWT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
53 54anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 164first strand
Strand 2
A
213 215anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
53 54anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 164first strand
Strand 2
B
213 215anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
B
289 290anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
53 54anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
144 145first strand
Strand 2
C
149 150anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 164first strand
Strand 2
C
213 215anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
278 279first strand
Strand 2
C
289 290anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 47first strand
Strand 2
D
53 54anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
162 164first strand
Strand 2
D
213 215anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
278 279first strand
Strand 2
D
289 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il