Analysis of interatomic Contacts of Structural Units in PDB entry:
3QXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QXM entry

There are 2 chains in PDB entry 3QXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 400ARG 769
B
 ASN 399PRO 774
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3QXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
423 426Right-handed 310
Helix 2
2
A
430 444Right-handed alpha
Helix 3
3
A
468 476Right-handed alpha
Helix 4
4
A
489 494Right-handed alpha
Helix 5
5
A
639 645Right-handed alpha
Helix 6
6
A
657 666Right-handed alpha
Helix 7
7
A
668 681Right-handed alpha
Helix 8
8
A
681 686Right-handed alpha
Helix 9
9
A
689 700Right-handed alpha
Helix 10
10
A
708 718Right-handed alpha
Helix 11
11
A
742 757Right-handed alpha
Helix 12
12
A
758 769Right-handed alpha
Helix 13
13
B
423 426Right-handed 310
Helix 14
14
B
430 444Right-handed alpha
Helix 15
15
B
468 476Right-handed alpha
Helix 16
16
B
489 494Right-handed alpha
Helix 17
17
B
639 645Right-handed alpha
Helix 18
18
B
657 666Right-handed alpha
Helix 19
19
B
668 681Right-handed alpha
Helix 20
20
B
681 686Right-handed alpha
Helix 21
21
B
689 700Right-handed alpha
Helix 22
22
B
708 718Right-handed alpha
Helix 23
23
B
742 757Right-handed alpha
Helix 24
24
B
758 769Right-handed alpha
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There are 10 sheets in PDB entry 3QXM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 451first strand
Strand 2
A
402 406parallel
Strand 3
A
481 482parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
414 415first strand
Strand 2
A
428 429anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 498first strand
Strand 2
A
736 738anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
503 505first strand
Strand 2
A
731 733anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 652first strand
Strand 2
A
702 707parallel
Strand 3
A
507 512anti-parallel
Strand 4
A
721 724anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 451first strand
Strand 2
B
402 406parallel
Strand 3
B
481 482parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
414 415first strand
Strand 2
B
428 429anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
496 498first strand
Strand 2
B
736 738anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
503 505first strand
Strand 2
B
731 733anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
650 652first strand
Strand 2
B
702 707parallel
Strand 3
B
507 512anti-parallel
Strand 4
B
721 724anti-parallel
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