Analysis of interatomic Contacts of Structural Units in PDB entry:
3QZ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QZ9 entry

There are 16 chains in PDB entry 3QZ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 7LEU 114
A
 SER 116SER 116
A
 TYR 118PRO 207
B
 MET 1ALA 219
C
 HIS 7LEU 114
C
 SER 116SER 116
C
 TYR 118PRO 207
D
 MET 1ALA 219
E
 ASP 8LEU 114
E
 SER 116SER 116
E
 TYR 118PRO 207
F
 MET 1ALA 219
G
 ASP 8LEU 114
G
 SER 116SER 116
G
 TYR 118PRO 207
H
 MET 1ALA 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 3QZ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 35Right-handed alpha
Helix 2
2
A
39 53Right-handed alpha
Helix 3
3
A
55 69Right-handed alpha
Helix 4
4
A
69 79Right-handed alpha
Helix 5
5
A
79 86Right-handed alpha
Helix 6
6
A
119 124Right-handed alpha
Helix 7
7
A
127 131Right-handed 310
Helix 8
8
A
132 140Right-handed alpha
Helix 9
9
A
142 150Right-handed alpha
Helix 10
10
A
185 193Right-handed alpha
Helix 11
11
A
194 200Right-handed alpha
Helix 12
12
B
27 43Right-handed alpha
Helix 13
13
B
47 57Right-handed alpha
Helix 14
14
B
59 66Right-handed alpha
Helix 15
15
B
67 83Right-handed alpha
Helix 16
16
B
87 94Right-handed alpha
Helix 17
17
B
107 118Right-handed alpha
Helix 18
18
B
151 155Right-handed 310
Helix 19
19
B
170 175Right-handed alpha
Helix 20
20
B
192 197Right-handed alpha
Helix 21
21
C
20 35Right-handed alpha
Helix 22
22
C
39 53Right-handed alpha
Helix 23
23
C
55 69Right-handed alpha
Helix 24
24
C
69 79Right-handed alpha
Helix 25
25
C
79 86Right-handed alpha
Helix 26
26
C
119 124Right-handed alpha
Helix 27
27
C
127 131Right-handed 310
Helix 28
28
C
132 140Right-handed alpha
Helix 29
29
C
142 150Right-handed alpha
Helix 30
30
C
185 191Right-handed alpha
Helix 31
31
C
194 200Right-handed alpha
Helix 32
32
D
27 43Right-handed alpha
Helix 33
33
D
47 57Right-handed alpha
Helix 34
34
D
59 66Right-handed alpha
Helix 35
35
D
67 83Right-handed alpha
Helix 36
36
D
87 94Right-handed alpha
Helix 37
37
D
107 118Right-handed alpha
Helix 38
38
D
151 155Right-handed 310
Helix 39
39
D
170 175Right-handed alpha
Helix 40
40
D
192 197Right-handed alpha
Helix 41
41
E
20 35Right-handed alpha
Helix 42
42
E
39 53Right-handed alpha
Helix 43
43
E
55 69Right-handed alpha
Helix 44
44
E
69 79Right-handed alpha
Helix 45
45
E
79 86Right-handed alpha
Helix 46
46
E
119 124Right-handed alpha
Helix 47
47
E
132 140Right-handed alpha
Helix 48
48
E
142 150Right-handed alpha
Helix 49
49
E
185 193Right-handed alpha
Helix 50
50
E
194 200Right-handed alpha
Helix 51
51
F
27 43Right-handed alpha
Helix 52
52
F
47 57Right-handed alpha
Helix 53
53
F
59 66Right-handed alpha
Helix 54
54
F
67 83Right-handed alpha
Helix 55
55
F
87 94Right-handed alpha
Helix 56
56
F
107 118Right-handed alpha
Helix 57
57
F
151 155Right-handed 310
Helix 58
58
F
170 175Right-handed alpha
Helix 59
59
F
192 197Right-handed alpha
Helix 60
60
G
20 35Right-handed alpha
Helix 61
61
G
39 53Right-handed alpha
Helix 62
62
G
55 69Right-handed alpha
Helix 63
63
G
69 79Right-handed alpha
Helix 64
64
G
79 86Right-handed alpha
Helix 65
65
G
119 124Right-handed alpha
Helix 66
66
G
127 131Right-handed 310
Helix 67
67
G
132 140Right-handed alpha
Helix 68
68
G
142 149Right-handed alpha
Helix 69
69
G
185 193Right-handed alpha
Helix 70
70
G
194 200Right-handed alpha
Helix 71
71
H
27 43Right-handed alpha
Helix 72
72
H
47 57Right-handed alpha
Helix 73
73
H
59 66Right-handed alpha
Helix 74
74
H
67 83Right-handed alpha
Helix 75
75
H
87 94Right-handed alpha
Helix 76
76
H
107 118Right-handed alpha
Helix 77
77
H
151 155Right-handed 310
Helix 78
78
H
170 175Right-handed alpha
Helix 79
79
H
192 197Right-handed alpha
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There are 8 sheets in PDB entry 3QZ9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 101first strand
Strand 2
A
170 174parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 111first strand
Strand 2
A
159 164parallel
Strand 3
B
206 212parallel
Strand 4
B
183 191anti-parallel
Strand 5
B
158 168anti-parallel
Strand 6
B
136 139anti-parallel
Strand 7
B
216 218anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 101first strand
Strand 2
C
170 174parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
106 111first strand
Strand 2
C
159 164parallel
Strand 3
D
206 212parallel
Strand 4
D
183 191anti-parallel
Strand 5
D
158 168anti-parallel
Strand 6
D
136 139anti-parallel
Strand 7
D
216 218anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
97 101first strand
Strand 2
E
170 174parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
106 111first strand
Strand 2
E
159 164parallel
Strand 3
F
206 212parallel
Strand 4
F
183 191anti-parallel
Strand 5
F
158 168anti-parallel
Strand 6
F
136 139anti-parallel
Strand 7
F
216 218anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
97 101first strand
Strand 2
G
170 174parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
106 111first strand
Strand 2
G
159 164parallel
Strand 3
H
206 212parallel
Strand 4
H
183 191anti-parallel
Strand 5
H
158 168anti-parallel
Strand 6
H
136 139anti-parallel
Strand 7
H
216 218anti-parallel
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