Analysis of interatomic Contacts of Structural Units in PDB entry:
3QZY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3QZY entry

There are 2 chains in PDB entry 3QZY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LEU 260
B
 GLY 1LEU 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3QZY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 24Right-handed alpha
Helix 2
2
A
32 55Right-handed alpha
Helix 3
3
A
58 72Right-handed alpha
Helix 4
4
A
77 92Right-handed alpha
Helix 5
5
A
94 98Right-handed 310
Helix 6
6
A
105 126Right-handed alpha
Helix 7
7
A
128 130Right-handed 310
Helix 8
8
A
131 148Right-handed alpha
Helix 9
9
A
155 166Right-handed alpha
Helix 10
10
A
166 185Right-handed alpha
Helix 11
11
A
215 236Right-handed alpha
Helix 12
12
A
248 256Right-handed alpha
Helix 13
13
B
5 24Right-handed alpha
Helix 14
14
B
25 29Right-handed 310
Helix 15
15
B
31 55Right-handed alpha
Helix 16
16
B
58 71Right-handed alpha
Helix 17
17
B
77 92Right-handed alpha
Helix 18
18
B
94 98Right-handed 310
Helix 19
19
B
105 126Right-handed alpha
Helix 20
20
B
128 130Right-handed 310
Helix 21
21
B
131 148Right-handed alpha
Helix 22
22
B
155 167Right-handed alpha
Helix 23
23
B
167 186Right-handed alpha
Helix 24
24
B
215 236Right-handed alpha
Helix 25
25
B
248 257Right-handed alpha
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There are 2 sheets in PDB entry 3QZY. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 192first strand
Strand 2
A
211 213parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 193first strand
Strand 2
B
211 213parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il