Analysis of interatomic Contacts of Structural Units in PDB entry:
3R0H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3R0H entry

There are 13 chains in PDB entry 3R0H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 475	PRO 672
a	ALA 1	VAL 9
B	GLU 476	ALA 671
b	ALA 1	VAL 9
C	GLU 476	LYS 673
c	ALA 1	VAL 9
D	GLN 475	LYS 673
d	ALA 1	VAL 9
E	PRO 474	PRO 672
e	ALA 1	VAL 9
F	GLN 475	PRO 672
f	ALA 1	VAL 9
G	THR 479	ASP 536

There are 40 helices in PDB entry 3R0H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	524	530	Right-handed alpha
Helix 2	2	A	547	551	Right-handed 310
Helix 3	3	A	552	562	Right-handed alpha
Helix 4	4	A	616	623	Right-handed alpha
Helix 5	5	A	641	651	Right-handed alpha
Helix 6	6	B	524	530	Right-handed alpha
Helix 7	7	B	547	551	Right-handed 310
Helix 8	8	B	552	562	Right-handed alpha
Helix 9	9	B	616	623	Right-handed alpha
Helix 10	10	B	641	651	Right-handed alpha
Helix 11	11	C	524	530	Right-handed alpha
Helix 12	12	C	547	551	Right-handed 310
Helix 13	13	C	552	559	Right-handed alpha
Helix 14	14	C	616	623	Right-handed alpha
Helix 15	15	C	641	652	Right-handed alpha
Helix 16	16	D	524	530	Right-handed alpha
Helix 17	17	D	547	551	Right-handed 310
Helix 18	18	D	552	561	Right-handed alpha
Helix 19	19	D	616	623	Right-handed alpha
Helix 20	20	D	641	652	Right-handed alpha
Helix 21	21	E	524	530	Right-handed alpha
Helix 22	22	E	547	551	Right-handed 310
Helix 23	23	E	552	559	Right-handed alpha
Helix 24	24	E	616	623	Right-handed alpha
Helix 25	25	E	641	651	Right-handed alpha
Helix 26	26	F	524	530	Right-handed alpha
Helix 27	27	F	547	551	Right-handed 310
Helix 28	28	F	552	559	Right-handed alpha
Helix 29	29	F	616	623	Right-handed alpha
Helix 30	30	F	641	651	Right-handed alpha
Helix 31	31	G	524	530	Right-handed alpha
Helix 32	32	G	547	551	Right-handed 310
Helix 33	33	G	552	559	Right-handed alpha
Helix 34	34	G	616	623	Right-handed alpha
Helix 35	35	G	641	651	Right-handed alpha
Helix 36	36	H	524	530	Right-handed alpha
Helix 37	37	H	547	551	Right-handed 310
Helix 38	38	H	552	559	Right-handed alpha
Helix 39	39	H	616	623	Right-handed alpha
Helix 40	40	H	641	651	Right-handed alpha

There are 40 sheets in PDB entry 3R0H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	493	first strand
Strand 2	A	567	573	anti-parallel
Strand 3	A	537	541	anti-parallel
Strand 4	A	515	520	anti-parallel
Strand 5	A	501	504	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	488	493	first strand
Strand 2	A	567	573	anti-parallel
Strand 3	A	537	541	anti-parallel
Strand 4	A	544	545	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	588	first strand
Strand 2	A	655	663	anti-parallel
Strand 3	A	628	632	anti-parallel
Strand 4	A	606	611	anti-parallel
Strand 5	A	597	601	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	580	588	first strand
Strand 2	A	655	663	anti-parallel
Strand 3	A	628	632	anti-parallel
Strand 4	A	635	636	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	2	3	first strand
Strand 2	a	6	7	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	493	first strand
Strand 2	B	567	573	anti-parallel
Strand 3	B	537	541	anti-parallel
Strand 4	B	515	520	anti-parallel
Strand 5	B	501	504	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	493	first strand
Strand 2	B	567	573	anti-parallel
Strand 3	B	537	541	anti-parallel
Strand 4	B	544	545	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	589	first strand
Strand 2	B	654	663	anti-parallel
Strand 3	B	628	632	anti-parallel
Strand 4	B	606	611	anti-parallel
Strand 5	B	597	601	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	580	589	first strand
Strand 2	B	654	663	anti-parallel
Strand 3	B	628	632	anti-parallel
Strand 4	B	635	636	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	2	3	first strand
Strand 2	b	6	7	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	493	first strand
Strand 2	C	567	573	anti-parallel
Strand 3	C	537	541	anti-parallel
Strand 4	C	515	520	anti-parallel
Strand 5	C	501	504	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	488	493	first strand
Strand 2	C	567	573	anti-parallel
Strand 3	C	537	541	anti-parallel
Strand 4	C	544	545	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	589	first strand
Strand 2	C	654	663	anti-parallel
Strand 3	C	628	632	anti-parallel
Strand 4	C	606	611	anti-parallel
Strand 5	C	597	601	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	589	first strand
Strand 2	C	654	663	anti-parallel
Strand 3	C	628	632	anti-parallel
Strand 4	C	635	636	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	2	3	first strand
Strand 2	c	6	7	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	487	493	first strand
Strand 2	D	567	573	anti-parallel
Strand 3	D	537	541	anti-parallel
Strand 4	D	544	545	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	501	504	first strand
Strand 2	D	516	520	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	580	589	first strand
Strand 2	D	654	663	anti-parallel
Strand 3	D	628	632	anti-parallel
Strand 4	D	606	611	anti-parallel
Strand 5	D	597	601	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	580	589	first strand
Strand 2	D	654	663	anti-parallel
Strand 3	D	628	632	anti-parallel
Strand 4	D	635	636	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	2	3	first strand
Strand 2	d	6	7	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	487	493	first strand
Strand 2	E	567	574	anti-parallel
Strand 3	E	536	541	anti-parallel
Strand 4	E	515	520	anti-parallel
Strand 5	E	501	504	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	487	493	first strand
Strand 2	E	567	574	anti-parallel
Strand 3	E	536	541	anti-parallel
Strand 4	E	544	545	anti-parallel

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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	580	588	first strand
Strand 2	E	655	663	anti-parallel
Strand 3	E	628	632	anti-parallel
Strand 4	E	606	611	anti-parallel
Strand 5	E	597	601	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	580	588	first strand
Strand 2	E	655	663	anti-parallel
Strand 3	E	628	632	anti-parallel
Strand 4	E	635	636	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	2	3	first strand
Strand 2	e	6	7	anti-parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	487	493	first strand
Strand 2	F	567	573	anti-parallel
Strand 3	F	537	541	anti-parallel
Strand 4	F	515	520	anti-parallel
Strand 5	F	501	504	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	487	493	first strand
Strand 2	F	567	573	anti-parallel
Strand 3	F	537	541	anti-parallel
Strand 4	F	544	545	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	580	589	first strand
Strand 2	F	654	663	anti-parallel
Strand 3	F	628	632	anti-parallel
Strand 4	F	606	611	anti-parallel
Strand 5	F	597	601	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	580	589	first strand
Strand 2	F	654	663	anti-parallel
Strand 3	F	628	632	anti-parallel
Strand 4	F	635	636	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	f	2	3	first strand
Strand 2	f	6	7	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	488	493	first strand
Strand 2	G	567	573	anti-parallel
Strand 3	G	537	541	anti-parallel
Strand 4	G	544	545	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	501	504	first strand
Strand 2	G	516	520	anti-parallel

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There are 5 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	580	588	first strand
Strand 2	G	655	663	anti-parallel
Strand 3	G	628	632	anti-parallel
Strand 4	G	606	611	anti-parallel
Strand 5	G	597	601	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	580	588	first strand
Strand 2	G	655	663	anti-parallel
Strand 3	G	628	632	anti-parallel
Strand 4	G	635	636	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	g	2	3	first strand
Strand 2	g	6	7	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	488	493	first strand
Strand 2	H	567	573	anti-parallel
Strand 3	H	537	541	anti-parallel
Strand 4	H	515	520	anti-parallel
Strand 5	H	501	504	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	488	493	first strand
Strand 2	H	567	573	anti-parallel
Strand 3	H	537	541	anti-parallel
Strand 4	H	544	545	anti-parallel

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There are 5 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	580	589	first strand
Strand 2	H	654	663	anti-parallel
Strand 3	H	628	632	anti-parallel
Strand 4	H	606	611	anti-parallel
Strand 5	H	597	601	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	580	589	first strand
Strand 2	H	654	663	anti-parallel
Strand 3	H	628	632	anti-parallel
Strand 4	H	635	636	anti-parallel

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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	2	3	first strand
Strand 2	h	6	7	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3R0H

Analysis of interatomic Contacts of Structural Units in PDB entry:
3R0H