Analysis of interatomic Contacts of Structural Units in PDB entry:
3R0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R0L entry

There are 4 chains in PDB entry 3R0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 25CYS 57
B
GLY 71THR 102
C
ASN 114CYS 122
D
HIS 1CYS 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3R0L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
36 53Right-handed alpha
Helix 2
2
B
79 101Right-handed alpha
Helix 3
3
D
1 14Right-handed alpha
Helix 4
4
D
16 21Right-handed alpha
Helix 5
5
D
38 53Right-handed alpha
Helix 6
6
D
79 99Right-handed alpha
Helix 7
7
D
100 103Right-handed 310
Helix 8
8
D
104 108Right-handed 310
Helix 9
9
D
111 115Right-handed 310
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There is 1 sheet ( A) in PDB entry 3R0L.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
66 68first strand
Strand 2
D
73 75anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il