Analysis of interatomic Contacts of Structural Units in PDB entry:
3R0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R0X entry

There is 1 chain in PDB entry 3R0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MSE 1LYS 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3R0X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1 9Right-handed alpha
Helix 2
2
A
12 19Right-handed alpha
Helix 3
3
A
32 37Right-handed alpha
Helix 4
4
A
38 40Right-handed 310
Helix 5
5
A
43 57Right-handed alpha
Helix 6
6
A
57 65Right-handed alpha
Helix 7
7
A
66 72Right-handed 310
Helix 8
8
A
82 94Right-handed alpha
Helix 9
9
A
107 109Right-handed 310
Helix 10
10
A
114 135Right-handed alpha
Helix 11
11
A
143 148Right-handed 310
Helix 12
12
A
149 157Right-handed alpha
Helix 13
13
A
167 181Right-handed alpha
Helix 14
14
A
193 202Right-handed alpha
Helix 15
15
A
213 227Right-handed alpha
Helix 16
16
A
239 248Right-handed alpha
Helix 17
17
A
248 261Right-handed alpha
Helix 18
18
A
279 294Right-handed alpha
Helix 19
19
A
308 317Right-handed alpha
Helix 20
20
A
318 322Right-handed 310
Helix 21
21
A
324 328Right-handed 310
Helix 22
22
A
335 339Right-handed 310
Helix 23
23
A
345 352Right-handed alpha
Helix 24
24
A
353 355Right-handed 310
Helix 25
25
A
362 378Right-handed alpha
Helix 26
26
A
382 389Right-handed 310
Helix 27
27
A
390 398Right-handed alpha
Helix 28
28
A
398 405Right-handed alpha
Helix 29
29
A
408 413Right-handed alpha
Helix 30
30
A
428 438Right-handed alpha
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There are 2 sheets in PDB entry 3R0X. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
24 26first strand
Strand 2
A
357 361anti-parallel
Strand 3
A
297 304parallel
Strand 4
A
270 275parallel
Strand 5
A
416 421parallel
Strand 6
A
100 105parallel
Strand 7
A
79 81anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
206 210first strand
Strand 2
A
183 189parallel
Strand 3
A
160 164parallel
Strand 4
A
231 234parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il