Analysis of interatomic Contacts of Structural Units in PDB entry:
3R11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R11 entry

There are 2 chains in PDB entry 3R11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2PHE 363
B
 VAL 2SER 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 3R11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 58Right-handed alpha
Helix 2
2
A
60 71Right-handed alpha
Helix 3
3
A
71 77Right-handed alpha
Helix 4
4
A
80 82Right-handed 310
Helix 5
5
A
83 93Right-handed alpha
Helix 6
6
A
98 117Right-handed alpha
Helix 7
7
A
120 126Right-handed alpha
Helix 8
8
A
142 156Right-handed alpha
Helix 9
9
A
168 183Right-handed alpha
Helix 10
10
A
198 211Right-handed alpha
Helix 11
11
A
227 238Right-handed alpha
Helix 12
12
A
250 260Right-handed alpha
Helix 13
13
A
269 274Right-handed alpha
Helix 14
14
A
275 290Right-handed alpha
Helix 15
15
A
301 315Right-handed alpha
Helix 16
16
A
322 328Right-handed 310
Helix 17
17
A
329 334Right-handed alpha
Helix 18
18
A
357 362Right-handed alpha
Helix 19
19
B
53 58Right-handed alpha
Helix 20
20
B
60 71Right-handed alpha
Helix 21
21
B
72 77Right-handed alpha
Helix 22
22
B
80 82Right-handed 310
Helix 23
23
B
83 93Right-handed alpha
Helix 24
24
B
98 117Right-handed alpha
Helix 25
25
B
120 126Right-handed alpha
Helix 26
26
B
142 156Right-handed alpha
Helix 27
27
B
168 183Right-handed alpha
Helix 28
28
B
198 210Right-handed alpha
Helix 29
29
B
227 238Right-handed alpha
Helix 30
30
B
250 260Right-handed alpha
Helix 31
31
B
269 274Right-handed alpha
Helix 32
32
B
275 290Right-handed alpha
Helix 33
33
B
301 315Right-handed alpha
Helix 34
34
B
322 328Right-handed 310
Helix 35
35
B
329 333Right-handed 310
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There are 6 sheets in PDB entry 3R11. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 22first strand
Strand 2
A
27 40anti-parallel
Strand 3
A
45 51anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
343 346anti-parallel
Strand 3
A
337 340anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
160 164parallel
Strand 3
A
188 192parallel
Strand 4
A
215 220parallel
Strand 5
A
242 244parallel
Strand 6
A
265 268parallel
Strand 7
A
292 295parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 22first strand
Strand 2
B
27 40anti-parallel
Strand 3
B
45 51anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
343 346anti-parallel
Strand 3
B
337 340anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 138first strand
Strand 2
B
160 164parallel
Strand 3
B
188 192parallel
Strand 4
B
215 220parallel
Strand 5
B
242 244parallel
Strand 6
B
265 268parallel
Strand 7
B
292 295parallel
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