Analysis of interatomic Contacts of Structural Units in PDB entry:
3R29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R29 entry

There are 4 chains in PDB entry 3R29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 227LEU 455
B
 ASN 227LEU 455
C
 THR 2337LYS 2352
D
 GLY 2340MET 2350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3R29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
231 242Right-handed alpha
Helix 2
2
A
265 270Right-handed alpha
Helix 3
3
A
271 285Right-handed alpha
Helix 4
4
A
293 317Right-handed alpha
Helix 5
5
A
334 339Right-handed alpha
Helix 6
6
A
342 353Right-handed alpha
Helix 7
7
A
353 361Right-handed alpha
Helix 8
8
A
363 376Right-handed alpha
Helix 9
9
A
385 408Right-handed alpha
Helix 10
10
A
413 444Right-handed alpha
Helix 11
11
B
232 243Right-handed alpha
Helix 12
12
B
263 269Right-handed alpha
Helix 13
13
B
271 285Right-handed alpha
Helix 14
14
B
293 318Right-handed alpha
Helix 15
15
B
334 340Right-handed alpha
Helix 16
16
B
342 353Right-handed alpha
Helix 17
17
B
353 360Right-handed alpha
Helix 18
18
B
363 376Right-handed alpha
Helix 19
19
B
385 408Right-handed alpha
Helix 20
20
B
413 420Right-handed alpha
Helix 21
21
B
420 442Right-handed alpha
Helix 22
22
B
449 453Right-handed 310
Helix 23
23
C
2341 2349Right-handed alpha
Helix 24
24
D
2341 2349Right-handed alpha
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There are 2 sheets in PDB entry 3R29. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 326first strand
Strand 2
B
330 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il