Analysis of interatomic Contacts of Structural Units in PDB entry:
3R5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R5C entry

There are 3 chains in PDB entry 3R5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0HIS 343
B
 MET 1ALA 342
C
 GLN 3ALA 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 3R5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 46Right-handed alpha
Helix 2
2
A
57 69Right-handed alpha
Helix 3
3
A
72 85Right-handed alpha
Helix 4
4
A
102 115Right-handed alpha
Helix 5
5
A
128 132Right-handed 310
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
172 176Right-handed 310
Helix 8
8
A
186 190Right-handed 310
Helix 9
9
A
306 309Right-handed 310
Helix 10
10
A
332 342Right-handed alpha
Helix 11
11
B
34 46Right-handed alpha
Helix 12
12
B
57 69Right-handed alpha
Helix 13
13
B
72 84Right-handed alpha
Helix 14
14
B
102 115Right-handed alpha
Helix 15
15
B
128 132Right-handed 310
Helix 16
16
B
144 158Right-handed alpha
Helix 17
17
B
172 176Right-handed 310
Helix 18
18
B
186 190Right-handed 310
Helix 19
19
B
306 309Right-handed 310
Helix 20
20
B
332 341Right-handed alpha
Helix 21
21
C
34 46Right-handed alpha
Helix 22
22
C
57 69Right-handed alpha
Helix 23
23
C
72 83Right-handed alpha
Helix 24
24
C
102 115Right-handed alpha
Helix 25
25
C
128 132Right-handed 310
Helix 26
26
C
147 158Right-handed alpha
Helix 27
27
C
172 176Right-handed 310
Helix 28
28
C
186 190Right-handed 310
Helix 29
29
C
306 309Right-handed 310
Helix 30
30
C
332 342Right-handed alpha
Back to top of page

There are 21 sheets in PDB entry 3R5C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 26first strand
Strand 2
A
7 15anti-parallel
Strand 3
A
30 31anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 26first strand
Strand 2
A
7 15anti-parallel
Strand 3
A
89 94anti-parallel
Strand 4
A
51 56anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
135 138anti-parallel
Strand 3
A
164 168anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 184first strand
Strand 2
A
200 202parallel
Strand 3
A
218 220parallel
Strand 4
A
234 236parallel
Strand 5
A
261 262parallel
Strand 6
A
277 278parallel
Strand 7
A
315 318parallel
Strand 8
A
325 328anti-parallel
Strand 9
A
289 293parallel
Strand 10
A
299 304anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
212 214parallel
Strand 3
A
229 230parallel
Strand 4
A
255 256parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
223 224parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
267 268parallel
Strand 3
A
283 284parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 26first strand
Strand 2
B
7 15anti-parallel
Strand 3
B
30 31anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 26first strand
Strand 2
B
7 15anti-parallel
Strand 3
B
89 94anti-parallel
Strand 4
B
51 56anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
135 138anti-parallel
Strand 3
B
164 168anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 184first strand
Strand 2
B
200 202parallel
Strand 3
B
218 220parallel
Strand 4
B
234 236parallel
Strand 5
B
261 262parallel
Strand 6
B
277 278parallel
Strand 7
B
315 318parallel
Strand 8
B
325 328anti-parallel
Strand 9
B
289 293parallel
Strand 10
B
299 304anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 196first strand
Strand 2
B
212 214parallel
Strand 3
B
229 230parallel
Strand 4
B
255 256parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
223 224parallel
Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 242first strand
Strand 2
B
267 268parallel
Strand 3
B
283 284parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 26first strand
Strand 2
C
7 15anti-parallel
Strand 3
C
30 31anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 26first strand
Strand 2
C
7 15anti-parallel
Strand 3
C
89 94anti-parallel
Strand 4
C
52 56anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
141 143first strand
Strand 2
C
135 138anti-parallel
Strand 3
C
164 168anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 184first strand
Strand 2
C
200 202parallel
Strand 3
C
218 220parallel
Strand 4
C
234 236parallel
Strand 5
C
261 262parallel
Strand 6
C
277 278parallel
Strand 7
C
315 318parallel
Strand 8
C
325 328anti-parallel
Strand 9
C
289 293parallel
Strand 10
C
299 304anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
194 196first strand
Strand 2
C
212 214parallel
Strand 3
C
229 230parallel
Strand 4
C
255 256parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
207 208first strand
Strand 2
C
223 224parallel
Back to list of sheets
Back to top of page

There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
241 242first strand
Strand 2
C
267 268parallel
Strand 3
C
283 284parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il