Analysis of interatomic Contacts of Structural Units in PDB entry:
3R6Q

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3R6Q entry

There are 3 chains in PDB entry 3R6Q (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	GLY 466
B	VAL 5	GLY 466
C	VAL 5	ILE 375

There are161 helices in PDB entry 3R6Q. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	24	34	Right-handed alpha
Helix 2	2	A	42	63	Right-handed alpha
Helix 3	3	A	67	83	Right-handed alpha
Helix 4	4	A	86	90	Right-handed 310
Helix 5	5	A	100	119	Right-handed alpha
Helix 6	6	A	140	178	Right-handed alpha
Helix 7	7	A	197	218	Right-handed alpha
Helix 8	8	A	218	223	Right-handed alpha
Helix 9	9	A	239	255	Right-handed alpha
Helix 10	10	A	263	270	Right-handed alpha
Helix 11	11	A	271	300	Right-handed alpha
Helix 12	12	A	327	353	Right-handed alpha
Helix 13	13	A	361	387	Right-handed alpha
Helix 14	14	A	388	391	Right-handed 310
Helix 15	15	A	394	404	Right-handed alpha
Helix 16	16	A	408	431	Right-handed alpha
Helix 17	17	A	435	440	Right-handed alpha
Helix 18	18	A	446	454	Right-handed alpha
Helix 19	19	A	455	460	Right-handed alpha
Helix 20	20	B	24	34	Right-handed alpha
Helix 21	21	B	42	63	Right-handed alpha
Helix 22	22	B	67	83	Right-handed alpha
Helix 23	23	B	86	90	Right-handed 310
Helix 24	24	B	100	120	Right-handed alpha
Helix 25	25	B	140	178	Right-handed alpha
Helix 26	26	B	197	223	Right-handed alpha
Helix 27	27	B	239	255	Right-handed alpha
Helix 28	28	B	263	270	Right-handed alpha
Helix 29	29	B	271	300	Right-handed alpha
Helix 30	30	B	327	353	Right-handed alpha
Helix 31	31	B	361	387	Right-handed alpha
Helix 32	32	B	388	391	Right-handed 310
Helix 33	33	B	394	404	Right-handed alpha
Helix 34	34	B	408	413	Right-handed alpha
Helix 35	35	B	414	416	Right-handed 310
Helix 36	36	B	417	432	Right-handed alpha
Helix 37	37	B	434	442	Right-handed alpha
Helix 38	38	B	446	454	Right-handed alpha
Helix 39	39	B	457	461	Right-handed 310
Helix 40	40	C	24	34	Right-handed alpha
Helix 41	41	C	42	63	Right-handed alpha
Helix 42	42	C	67	83	Right-handed alpha
Helix 43	43	C	86	90	Right-handed 310
Helix 44	44	C	100	119	Right-handed alpha
Helix 45	45	C	140	178	Right-handed alpha
Helix 46	46	C	197	218	Right-handed alpha
Helix 47	47	C	219	223	Right-handed alpha
Helix 48	48	C	239	255	Right-handed alpha
Helix 49	49	C	263	270	Right-handed alpha
Helix 50	50	C	271	300	Right-handed alpha
Helix 51	51	C	327	353	Right-handed alpha
Helix 52	52	C	361	387	Right-handed alpha
Helix 53	53	C	388	391	Right-handed 310
Helix 54	54	C	394	404	Right-handed alpha
Helix 55	55	C	408	413	Right-handed alpha
Helix 56	56	C	414	416	Right-handed 310
Helix 57	57	C	417	432	Right-handed alpha
Helix 58	58	C	434	442	Right-handed alpha
Helix 59	59	C	446	454	Right-handed alpha
Helix 60	60	C	457	461	Right-handed 310
Helix 61	61	D	24	34	Right-handed alpha
Helix 62	62	D	42	63	Right-handed alpha
Helix 63	63	D	67	83	Right-handed alpha
Helix 64	64	D	86	90	Right-handed 310
Helix 65	65	D	97	99	Right-handed 310
Helix 66	66	D	100	119	Right-handed alpha
Helix 67	67	D	140	178	Right-handed alpha
Helix 68	68	D	197	218	Right-handed alpha
Helix 69	69	D	219	222	Right-handed 310
Helix 70	70	D	239	255	Right-handed alpha
Helix 71	71	D	263	270	Right-handed alpha
Helix 72	72	D	271	300	Right-handed alpha
Helix 73	73	D	327	353	Right-handed alpha
Helix 74	74	D	361	387	Right-handed alpha
Helix 75	75	D	388	391	Right-handed 310
Helix 76	76	D	394	404	Right-handed alpha
Helix 77	77	D	408	432	Right-handed alpha
Helix 78	78	D	434	442	Right-handed alpha
Helix 79	79	D	446	454	Right-handed alpha
Helix 80	80	D	455	460	Right-handed alpha
Helix 81	81	E	24	34	Right-handed alpha
Helix 82	82	E	42	63	Right-handed alpha
Helix 83	83	E	67	83	Right-handed alpha
Helix 84	84	E	86	90	Right-handed 310
Helix 85	85	E	97	99	Right-handed 310
Helix 86	86	E	100	119	Right-handed alpha
Helix 87	87	E	140	178	Right-handed alpha
Helix 88	88	E	197	218	Right-handed alpha
Helix 89	89	E	219	222	Right-handed 310
Helix 90	90	E	239	255	Right-handed alpha
Helix 91	91	E	263	270	Right-handed alpha
Helix 92	92	E	271	300	Right-handed alpha
Helix 93	93	E	327	353	Right-handed alpha
Helix 94	94	E	361	387	Right-handed alpha
Helix 95	95	E	388	391	Right-handed 310
Helix 96	96	E	394	404	Right-handed alpha
Helix 97	97	E	408	432	Right-handed alpha
Helix 98	98	E	434	443	Right-handed alpha
Helix 99	99	E	448	454	Right-handed alpha
Helix 100	100	E	457	461	Right-handed 310
Helix 101	101	F	24	34	Right-handed alpha
Helix 102	102	F	42	64	Right-handed alpha
Helix 103	103	F	67	83	Right-handed alpha
Helix 104	104	F	86	90	Right-handed 310
Helix 105	105	F	100	119	Right-handed alpha
Helix 106	106	F	140	178	Right-handed alpha
Helix 107	107	F	197	218	Right-handed alpha
Helix 108	108	F	219	222	Right-handed 310
Helix 109	109	F	239	255	Right-handed alpha
Helix 110	110	F	263	270	Right-handed alpha
Helix 111	111	F	271	300	Right-handed alpha
Helix 112	112	F	327	353	Right-handed alpha
Helix 113	113	F	361	387	Right-handed alpha
Helix 114	114	F	388	391	Right-handed 310
Helix 115	115	F	394	404	Right-handed alpha
Helix 116	116	F	408	417	Right-handed alpha
Helix 117	117	F	417	432	Right-handed alpha
Helix 118	118	F	434	442	Right-handed alpha
Helix 119	119	F	446	454	Right-handed alpha
Helix 120	120	F	457	461	Right-handed 310
Helix 121	121	G	24	34	Right-handed alpha
Helix 122	122	G	42	63	Right-handed alpha
Helix 123	123	G	67	83	Right-handed alpha
Helix 124	124	G	86	90	Right-handed 310
Helix 125	125	G	100	119	Right-handed alpha
Helix 126	126	G	140	178	Right-handed alpha
Helix 127	127	G	197	218	Right-handed alpha
Helix 128	128	G	219	223	Right-handed alpha
Helix 129	129	G	239	255	Right-handed alpha
Helix 130	130	G	263	270	Right-handed alpha
Helix 131	131	G	271	299	Right-handed alpha
Helix 132	132	G	327	353	Right-handed alpha
Helix 133	133	G	361	387	Right-handed alpha
Helix 134	134	G	388	391	Right-handed 310
Helix 135	135	G	394	404	Right-handed alpha
Helix 136	136	G	408	417	Right-handed alpha
Helix 137	137	G	417	432	Right-handed alpha
Helix 138	138	G	434	442	Right-handed alpha
Helix 139	139	G	446	454	Right-handed alpha
Helix 140	140	G	457	461	Right-handed 310
Helix 141	141	H	24	34	Right-handed alpha
Helix 142	142	H	42	63	Right-handed alpha
Helix 143	143	H	67	83	Right-handed alpha
Helix 144	144	H	86	90	Right-handed 310
Helix 145	145	H	97	99	Right-handed 310
Helix 146	146	H	100	119	Right-handed alpha
Helix 147	147	H	140	178	Right-handed alpha
Helix 148	148	H	197	218	Right-handed alpha
Helix 149	149	H	218	223	Right-handed alpha
Helix 150	150	H	239	255	Right-handed alpha
Helix 151	151	H	263	270	Right-handed alpha
Helix 152	152	H	271	300	Right-handed alpha
Helix 153	153	H	327	352	Right-handed alpha
Helix 154	154	H	361	387	Right-handed alpha
Helix 155	155	H	388	391	Right-handed 310
Helix 156	156	H	394	405	Right-handed alpha
Helix 157	157	H	408	417	Right-handed alpha
Helix 158	158	H	417	432	Right-handed alpha
Helix 159	159	H	434	442	Right-handed alpha
Helix 160	160	H	446	454	Right-handed alpha
Helix 161	161	H	457	461	Right-handed 310

There are 32 sheets in PDB entry 3R6Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	10	first strand
Strand 2	A	13	17	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	187	first strand
Strand 2	A	190	196	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	259	260	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	310	first strand
Strand 2	A	392	393	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	10	first strand
Strand 2	B	13	16	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	187	first strand
Strand 2	B	190	196	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	225	first strand
Strand 2	B	259	260	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	310	first strand
Strand 2	B	392	393	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	9	first strand
Strand 2	C	14	17	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	187	first strand
Strand 2	C	190	196	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	259	260	parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	310	first strand
Strand 2	C	392	393	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	10	first strand
Strand 2	D	13	17	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	187	first strand
Strand 2	D	190	196	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	259	260	parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	309	310	first strand
Strand 2	D	392	393	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	8	first strand
Strand 2	E	15	17	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	187	first strand
Strand 2	E	190	196	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	224	225	first strand
Strand 2	E	259	260	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	310	first strand
Strand 2	E	392	393	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	10	first strand
Strand 2	F	13	18	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	187	first strand
Strand 2	F	190	196	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	224	225	first strand
Strand 2	F	259	260	parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	309	310	first strand
Strand 2	F	392	393	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	6	10	first strand
Strand 2	G	13	17	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	182	187	first strand
Strand 2	G	190	196	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	224	225	first strand
Strand 2	G	259	260	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	309	310	first strand
Strand 2	G	392	393	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	10	first strand
Strand 2	H	13	17	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	187	first strand
Strand 2	H	190	196	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	224	225	first strand
Strand 2	H	259	260	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	309	310	first strand
Strand 2	H	392	393	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3R6Q

Analysis of interatomic Contacts of Structural Units in PDB entry:
3R6Q