Analysis of interatomic Contacts of Structural Units in PDB entry:
3R6Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3R6Y entry

There are 8 chains in PDB entry 3R6Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	ASN 394
B	VAL 5	ASN 394
C	VAL 5	ASN 394
D	VAL 5	ASN 394
E	VAL 5	GLU 395
F	VAL 5	ASN 394
G	VAL 5	GLU 395
H	VAL 5	ASN 394

There are105 helices in PDB entry 3R6Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	24	34	Right-handed alpha
Helix 2	2	A	42	63	Right-handed alpha
Helix 3	3	A	67	83	Right-handed alpha
Helix 4	4	A	100	119	Right-handed alpha
Helix 5	5	A	140	178	Right-handed alpha
Helix 6	6	A	197	217	Right-handed alpha
Helix 7	7	A	219	223	Right-handed alpha
Helix 8	8	A	239	255	Right-handed alpha
Helix 9	9	A	263	270	Right-handed alpha
Helix 10	10	A	271	299	Right-handed alpha
Helix 11	11	A	327	354	Right-handed alpha
Helix 12	12	A	361	387	Right-handed alpha
Helix 13	13	A	388	391	Right-handed 310
Helix 14	14	B	24	34	Right-handed alpha
Helix 15	15	B	42	63	Right-handed alpha
Helix 16	16	B	67	83	Right-handed alpha
Helix 17	17	B	100	119	Right-handed alpha
Helix 18	18	B	140	178	Right-handed alpha
Helix 19	19	B	197	218	Right-handed alpha
Helix 20	20	B	219	224	Right-handed alpha
Helix 21	21	B	239	255	Right-handed alpha
Helix 22	22	B	265	270	Right-handed alpha
Helix 23	23	B	271	299	Right-handed alpha
Helix 24	24	B	327	353	Right-handed alpha
Helix 25	25	B	361	386	Right-handed alpha
Helix 26	26	C	24	34	Right-handed alpha
Helix 27	27	C	42	63	Right-handed alpha
Helix 28	28	C	67	83	Right-handed alpha
Helix 29	29	C	97	99	Right-handed 310
Helix 30	30	C	100	119	Right-handed alpha
Helix 31	31	C	140	178	Right-handed alpha
Helix 32	32	C	197	217	Right-handed alpha
Helix 33	33	C	219	223	Right-handed alpha
Helix 34	34	C	239	255	Right-handed alpha
Helix 35	35	C	265	270	Right-handed alpha
Helix 36	36	C	271	299	Right-handed alpha
Helix 37	37	C	327	353	Right-handed alpha
Helix 38	38	C	361	386	Right-handed alpha
Helix 39	39	C	387	391	Right-handed 310
Helix 40	40	D	24	34	Right-handed alpha
Helix 41	41	D	42	63	Right-handed alpha
Helix 42	42	D	69	83	Right-handed alpha
Helix 43	43	D	100	119	Right-handed alpha
Helix 44	44	D	140	178	Right-handed alpha
Helix 45	45	D	197	218	Right-handed alpha
Helix 46	46	D	219	223	Right-handed alpha
Helix 47	47	D	239	255	Right-handed alpha
Helix 48	48	D	265	270	Right-handed alpha
Helix 49	49	D	271	299	Right-handed alpha
Helix 50	50	D	327	353	Right-handed alpha
Helix 51	51	D	361	386	Right-handed alpha
Helix 52	52	D	387	391	Right-handed 310
Helix 53	53	E	24	34	Right-handed alpha
Helix 54	54	E	42	63	Right-handed alpha
Helix 55	55	E	67	83	Right-handed alpha
Helix 56	56	E	97	99	Right-handed 310
Helix 57	57	E	100	119	Right-handed alpha
Helix 58	58	E	140	178	Right-handed alpha
Helix 59	59	E	197	218	Right-handed alpha
Helix 60	60	E	219	222	Right-handed 310
Helix 61	61	E	239	255	Right-handed alpha
Helix 62	62	E	263	270	Right-handed alpha
Helix 63	63	E	271	299	Right-handed alpha
Helix 64	64	E	327	354	Right-handed alpha
Helix 65	65	E	361	387	Right-handed alpha
Helix 66	66	F	24	34	Right-handed alpha
Helix 67	67	F	42	64	Right-handed alpha
Helix 68	68	F	67	82	Right-handed alpha
Helix 69	69	F	86	90	Right-handed 310
Helix 70	70	F	100	119	Right-handed alpha
Helix 71	71	F	140	178	Right-handed alpha
Helix 72	72	F	197	218	Right-handed alpha
Helix 73	73	F	219	222	Right-handed 310
Helix 74	74	F	239	254	Right-handed alpha
Helix 75	75	F	265	270	Right-handed alpha
Helix 76	76	F	271	299	Right-handed alpha
Helix 77	77	F	327	353	Right-handed alpha
Helix 78	78	F	361	387	Right-handed alpha
Helix 79	79	F	388	391	Right-handed 310
Helix 80	80	G	24	34	Right-handed alpha
Helix 81	81	G	42	63	Right-handed alpha
Helix 82	82	G	67	83	Right-handed alpha
Helix 83	83	G	97	99	Right-handed 310
Helix 84	84	G	100	119	Right-handed alpha
Helix 85	85	G	140	178	Right-handed alpha
Helix 86	86	G	197	217	Right-handed alpha
Helix 87	87	G	218	222	Right-handed 310
Helix 88	88	G	239	255	Right-handed alpha
Helix 89	89	G	265	270	Right-handed alpha
Helix 90	90	G	271	299	Right-handed alpha
Helix 91	91	G	327	354	Right-handed alpha
Helix 92	92	G	361	387	Right-handed alpha
Helix 93	93	G	388	391	Right-handed 310
Helix 94	94	H	24	34	Right-handed alpha
Helix 95	95	H	42	63	Right-handed alpha
Helix 96	96	H	67	83	Right-handed alpha
Helix 97	97	H	100	119	Right-handed alpha
Helix 98	98	H	140	178	Right-handed alpha
Helix 99	99	H	197	218	Right-handed alpha
Helix 100	100	H	239	255	Right-handed alpha
Helix 101	101	H	263	270	Right-handed alpha
Helix 102	102	H	271	299	Right-handed alpha
Helix 103	103	H	327	353	Right-handed alpha
Helix 104	104	H	361	387	Right-handed alpha
Helix 105	105	H	388	391	Right-handed 310

There are 31 sheets in PDB entry 3R6Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	A	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	187	first strand
Strand 2	A	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	224	225	first strand
Strand 2	A	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	310	first strand
Strand 2	A	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	9	first strand
Strand 2	B	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	187	first strand
Strand 2	B	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	310	first strand
Strand 2	B	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	8	9	first strand
Strand 2	C	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	187	first strand
Strand 2	C	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	224	225	first strand
Strand 2	C	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	310	first strand
Strand 2	C	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	8	9	first strand
Strand 2	D	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	183	first strand
Strand 2	D	195	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	224	225	first strand
Strand 2	D	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	309	310	first strand
Strand 2	D	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	9	first strand
Strand 2	E	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	187	first strand
Strand 2	E	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	224	225	first strand
Strand 2	E	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	309	310	first strand
Strand 2	E	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	187	first strand
Strand 2	F	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	224	225	first strand
Strand 2	F	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	309	310	first strand
Strand 2	F	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	8	9	first strand
Strand 2	G	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	182	187	first strand
Strand 2	G	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	224	225	first strand
Strand 2	G	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	309	310	first strand
Strand 2	G	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	8	9	first strand
Strand 2	H	14	15	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	187	first strand
Strand 2	H	190	196	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	224	225	first strand
Strand 2	H	259	260	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	309	310	first strand
Strand 2	H	392	393	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3R6Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
3R6Y