Analysis of interatomic Contacts of Structural Units in PDB entry:
3R79


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R79 entry

There are 2 chains in PDB entry 3R79 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 2HIS 229
B
 GLU 3PHE 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3R79. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 22Right-handed alpha
Helix 2
2
A
25 29Right-handed 310
Helix 3
3
A
39 49Right-handed alpha
Helix 4
4
A
58 73Right-handed alpha
Helix 5
5
A
85 87Right-handed 310
Helix 6
6
A
88 96Right-handed alpha
Helix 7
7
A
104 119Right-handed alpha
Helix 8
8
A
140 154Right-handed alpha
Helix 9
9
A
172 187Right-handed alpha
Helix 10
10
A
198 205Right-handed alpha
Helix 11
11
A
213 218Right-handed alpha
Helix 12
12
A
219 227Right-handed alpha
Helix 13
13
B
3 22Right-handed alpha
Helix 14
14
B
25 29Right-handed 310
Helix 15
15
B
39 49Right-handed alpha
Helix 16
16
B
58 73Right-handed alpha
Helix 17
17
B
85 87Right-handed 310
Helix 18
18
B
88 96Right-handed alpha
Helix 19
19
B
104 119Right-handed alpha
Helix 20
20
B
140 154Right-handed alpha
Helix 21
21
B
172 187Right-handed alpha
Helix 22
22
B
198 205Right-handed alpha
Helix 23
23
B
213 218Right-handed alpha
Helix 24
24
B
219 226Right-handed alpha
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There are 2 sheets in PDB entry 3R79. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
53 56parallel
Strand 3
A
77 80parallel
Strand 4
A
98 102parallel
Strand 5
A
123 127parallel
Strand 6
A
161 163parallel
Strand 7
A
190 192parallel
Strand 8
A
209 212parallel
Strand 9
A
30 34parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
53 56parallel
Strand 3
B
77 80parallel
Strand 4
B
98 102parallel
Strand 5
B
123 127parallel
Strand 6
B
159 163parallel
Strand 7
B
190 192parallel
Strand 8
B
209 212parallel
Strand 9
B
30 34parallel
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