Analysis of interatomic Contacts of Structural Units in PDB entry:
3R7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3R7F entry

There are 3 chains in PDB entry 3R7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 291
B
 MET 1THR 291
C
 MET 1THR 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3R7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
11 27Right-handed alpha
Helix 3
3
A
48 61Right-handed alpha
Helix 4
4
A
80 92Right-handed alpha
Helix 5
5
A
105 113Right-handed alpha
Helix 6
6
A
127 143Right-handed alpha
Helix 7
7
A
159 172Right-handed alpha
Helix 8
8
A
181 185Right-handed 310
Helix 9
9
A
196 204Right-handed alpha
Helix 10
10
A
225 231Right-handed alpha
Helix 11
11
A
233 238Right-handed alpha
Helix 12
12
A
259 263Right-handed 310
Helix 13
13
A
269 290Right-handed alpha
Helix 14
14
B
6 10Right-handed 310
Helix 15
15
B
11 27Right-handed alpha
Helix 16
16
B
48 61Right-handed alpha
Helix 17
17
B
80 92Right-handed alpha
Helix 18
18
B
104 113Right-handed alpha
Helix 19
19
B
127 143Right-handed alpha
Helix 20
20
B
159 172Right-handed alpha
Helix 21
21
B
181 185Right-handed 310
Helix 22
22
B
196 204Right-handed alpha
Helix 23
23
B
225 231Right-handed alpha
Helix 24
24
B
233 238Right-handed alpha
Helix 25
25
B
259 263Right-handed 310
Helix 26
26
B
269 290Right-handed alpha
Helix 27
27
C
6 10Right-handed 310
Helix 28
28
C
11 27Right-handed alpha
Helix 29
29
C
48 61Right-handed alpha
Helix 30
30
C
80 92Right-handed alpha
Helix 31
31
C
105 113Right-handed alpha
Helix 32
32
C
127 143Right-handed alpha
Helix 33
33
C
155 158Right-handed 310
Helix 34
34
C
159 172Right-handed alpha
Helix 35
35
C
181 185Right-handed 310
Helix 36
36
C
196 204Right-handed alpha
Helix 37
37
C
225 231Right-handed alpha
Helix 38
38
C
233 239Right-handed alpha
Helix 39
39
C
259 263Right-handed 310
Helix 40
40
C
269 290Right-handed alpha
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There are 6 sheets in PDB entry 3R7F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
38 43parallel
Strand 3
A
95 99parallel
Strand 4
A
117 119parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
175 179parallel
Strand 3
A
149 153parallel
Strand 4
A
206 209parallel
Strand 5
A
245 247parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 68first strand
Strand 2
B
38 43parallel
Strand 3
B
95 99parallel
Strand 4
B
117 121parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
175 179parallel
Strand 3
B
149 153parallel
Strand 4
B
206 209parallel
Strand 5
B
245 247parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
64 69first strand
Strand 2
C
38 43parallel
Strand 3
C
95 100parallel
Strand 4
C
117 122parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
193 194first strand
Strand 2
C
175 179parallel
Strand 3
C
149 153parallel
Strand 4
C
206 209parallel
Strand 5
C
245 247parallel
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