Analysis of interatomic Contacts of Structural Units in PDB entry:
3RBN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RBN entry

There are 2 chains in PDB entry 3RBN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 10LYS 284
B
 ASN 13LYS 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3RBN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 50Right-handed alpha
Helix 2
2
A
51 60Right-handed alpha
Helix 3
3
A
85 100Right-handed alpha
Helix 4
4
A
115 124Right-handed alpha
Helix 5
5
A
125 129Right-handed 310
Helix 6
6
A
136 160Right-handed alpha
Helix 7
7
A
182 184Right-handed 310
Helix 8
8
A
185 196Right-handed alpha
Helix 9
9
A
201 218Right-handed alpha
Helix 10
10
A
220 224Right-handed 310
Helix 11
11
A
244 252Right-handed alpha
Helix 12
12
A
252 258Right-handed alpha
Helix 13
13
A
264 269Right-handed 310
Helix 14
14
B
13 17Right-handed 310
Helix 15
15
B
36 49Right-handed alpha
Helix 16
16
B
51 60Right-handed alpha
Helix 17
17
B
85 100Right-handed alpha
Helix 18
18
B
115 124Right-handed alpha
Helix 19
19
B
125 129Right-handed 310
Helix 20
20
B
131 135Right-handed 310
Helix 21
21
B
136 160Right-handed alpha
Helix 22
22
B
182 184Right-handed 310
Helix 23
23
B
185 196Right-handed alpha
Helix 24
24
B
201 218Right-handed alpha
Helix 25
25
B
220 224Right-handed 310
Helix 26
26
B
244 252Right-handed alpha
Helix 27
27
B
252 257Right-handed alpha
Helix 28
28
B
264 269Right-handed 310
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There are 4 sheets in PDB entry 3RBN. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
71 76anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
273 278anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 114first strand
Strand 2
A
168 174anti-parallel
Strand 3
A
162 163anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
71 76anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
273 278anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 114first strand
Strand 2
B
168 174anti-parallel
Strand 3
B
162 163anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il