Analysis of interatomic Contacts of Structural Units in PDB entry:
3RBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RBW entry

There are 4 chains in PDB entry 3RBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 38HIS 232
B
 ASP 38HIS 232
C
 ARG 37HIS 232
D
 ARG 37LEU 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3RBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 49Right-handed alpha
Helix 2
2
A
54 71Right-handed alpha
Helix 3
3
A
121 139Right-handed alpha
Helix 4
4
A
150 162Right-handed alpha
Helix 5
5
A
195 204Right-handed alpha
Helix 6
6
A
205 207Right-handed 310
Helix 7
7
A
209 211Right-handed 310
Helix 8
8
A
212 231Right-handed alpha
Helix 9
9
B
42 50Right-handed alpha
Helix 10
10
B
54 74Right-handed alpha
Helix 11
11
B
121 137Right-handed alpha
Helix 12
12
B
150 162Right-handed alpha
Helix 13
13
B
195 206Right-handed alpha
Helix 14
14
B
209 211Right-handed 310
Helix 15
15
B
212 231Right-handed alpha
Helix 16
16
C
42 50Right-handed alpha
Helix 17
17
C
54 74Right-handed alpha
Helix 18
18
C
121 138Right-handed alpha
Helix 19
19
C
150 160Right-handed alpha
Helix 20
20
C
195 201Right-handed alpha
Helix 21
21
C
201 206Right-handed alpha
Helix 22
22
C
209 211Right-handed 310
Helix 23
23
C
212 231Right-handed alpha
Helix 24
24
D
42 50Right-handed alpha
Helix 25
25
D
54 74Right-handed alpha
Helix 26
26
D
121 138Right-handed alpha
Helix 27
27
D
150 160Right-handed alpha
Helix 28
28
D
195 206Right-handed alpha
Helix 29
29
D
209 211Right-handed 310
Helix 30
30
D
212 231Right-handed alpha
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There are 4 sheets in PDB entry 3RBW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
88 91anti-parallel
Strand 3
A
96 98anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
88 91anti-parallel
Strand 3
B
96 98anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
39 41first strand
Strand 2
C
88 91anti-parallel
Strand 3
C
96 98anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 41first strand
Strand 2
D
88 91anti-parallel
Strand 3
D
96 98anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il