Analysis of interatomic Contacts of Structural Units in PDB entry:
3RC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RC8 entry

There are 2 chains in PDB entry 3RC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 58GLU 689
E
 C 4 C 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3RC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 64Right-handed 310
Helix 2
2
A
89 103Right-handed alpha
Helix 3
3
A
103 113Right-handed alpha
Helix 4
4
A
116 134Right-handed alpha
Helix 5
5
A
138 151Right-handed alpha
Helix 6
6
A
154 157Right-handed 310
Helix 7
7
A
158 170Right-handed alpha
Helix 8
8
A
171 174Right-handed 310
Helix 9
9
A
175 183Right-handed alpha
Helix 10
10
A
187 191Right-handed 310
Helix 11
11
A
192 197Right-handed alpha
Helix 12
12
A
214 224Right-handed alpha
Helix 13
13
A
233 247Right-handed alpha
Helix 14
14
A
277 279Right-handed 310
Helix 15
15
A
293 298Right-handed 310
Helix 16
16
A
301 312Right-handed alpha
Helix 17
17
A
322 324Right-handed 310
Helix 18
18
A
325 337Right-handed alpha
Helix 19
19
A
374 388Right-handed alpha
Helix 20
20
A
400 413Right-handed alpha
Helix 21
21
A
425 429Right-handed 310
Helix 22
22
A
460 469Right-handed alpha
Helix 23
23
A
487 499Right-handed alpha
Helix 24
24
A
513 524Right-handed alpha
Helix 25
25
A
528 540Right-handed alpha
Helix 26
26
A
551 561Right-handed alpha
Helix 27
27
A
567 577Right-handed alpha
Helix 28
28
A
583 599Right-handed alpha
Helix 29
29
A
604 612Right-handed alpha
Helix 30
30
A
621 645Right-handed alpha
Helix 31
31
A
651 672Right-handed alpha
Helix 32
32
A
672 682Right-handed alpha
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There are 3 sheets in PDB entry 3RC8. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 260first strand
Strand 2
A
251 254anti-parallel
Strand 3
A
271 275parallel
Strand 4
A
227 231parallel
Strand 5
A
284 291parallel
Strand 6
A
313 321parallel
Strand 7
A
201 206parallel
Strand 8
A
340 344parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 353first strand
Strand 2
A
481 485parallel
Strand 3
A
437 440parallel
Strand 4
A
368 371parallel
Strand 5
A
420 423parallel
Strand 6
A
392 395parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
546 548parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il