Analysis of interatomic Contacts of Structural Units in PDB entry:
3RE2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RE2 entry

There is 1 chain in PDB entry 3RE2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4ALA 475
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3RE2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
59 76Right-handed alpha
Helix 4
4
A
88 103Right-handed alpha
Helix 5
5
A
116 124Right-handed alpha
Helix 6
6
A
127 143Right-handed alpha
Helix 7
7
A
194 201Right-handed 310
Helix 8
8
A
206 217Right-handed alpha
Helix 9
9
A
228 245Right-handed alpha
Helix 10
10
A
251 265Right-handed alpha
Helix 11
11
A
272 288Right-handed alpha
Helix 12
12
A
293 306Right-handed alpha
Helix 13
13
A
308 324Right-handed alpha
Helix 14
14
A
329 331Right-handed 310
Helix 15
15
A
332 345Right-handed alpha
Helix 16
16
A
345 356Right-handed alpha
Helix 17
17
A
367 370Right-handed 310
Helix 18
18
A
371 390Right-handed alpha
Helix 19
19
A
398 411Right-handed alpha
Helix 20
20
A
413 423Right-handed alpha
Helix 21
21
A
424 446Right-handed 310
Helix 22
22
A
448 456Right-handed alpha
Helix 23
23
A
465 474Right-handed alpha
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There are 2 sheets in PDB entry 3RE2. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
156 160anti-parallel
Strand 3
A
148 151anti-parallel
Strand 4
A
203 204anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 223first strand
Strand 2
A
226 227anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il