Analysis of interatomic Contacts of Structural Units in PDB entry:
3RGQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RGQ entry

There is 1 chain in PDB entry 3RGQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 104ALA 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3RGQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
120 122Right-handed 310
Helix 2
2
A
123 130Right-handed alpha
Helix 3
3
A
141 146Right-handed alpha
Helix 4
4
A
151 158Right-handed alpha
Helix 5
5
A
175 192Right-handed alpha
Helix 6
6
A
205 220Right-handed alpha
Helix 7
7
A
222 234Right-handed alpha
Helix 8
8
A
240 259Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3RGQ.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
113 116anti-parallel
Strand 3
A
195 199parallel
Strand 4
A
133 138parallel
Strand 5
A
161 164parallel
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