Analysis of interatomic Contacts of Structural Units in PDB entry:
3RHT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RHT entry

There are 4 chains in PDB entry 3RHT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3SER 254
B
 ARG 3SER 254
C
 ARG 3SER 254
D
 ARG 3SER 254
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3RHT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
42 47Right-handed alpha
Helix 3
3
A
57 61Right-handed 310
Helix 4
4
A
62 75Right-handed alpha
Helix 5
5
A
94 103Right-handed 310
Helix 6
6
A
127 133Right-handed 310
Helix 7
7
A
213 219Right-handed 310
Helix 8
8
A
238 253Right-handed alpha
Helix 9
9
B
16 26Right-handed alpha
Helix 10
10
B
42 47Right-handed alpha
Helix 11
11
B
57 61Right-handed 310
Helix 12
12
B
62 75Right-handed alpha
Helix 13
13
B
94 103Right-handed 310
Helix 14
14
B
127 133Right-handed 310
Helix 15
15
B
213 219Right-handed 310
Helix 16
16
B
238 253Right-handed alpha
Helix 17
17
C
16 26Right-handed alpha
Helix 18
18
C
42 47Right-handed alpha
Helix 19
19
C
57 61Right-handed 310
Helix 20
20
C
62 75Right-handed alpha
Helix 21
21
C
94 103Right-handed 310
Helix 22
22
C
127 133Right-handed 310
Helix 23
23
C
213 219Right-handed 310
Helix 24
24
C
238 253Right-handed alpha
Helix 25
25
D
16 26Right-handed alpha
Helix 26
26
D
42 47Right-handed alpha
Helix 27
27
D
57 61Right-handed 310
Helix 28
28
D
62 75Right-handed alpha
Helix 29
29
D
94 103Right-handed 310
Helix 30
30
D
127 133Right-handed 310
Helix 31
31
D
213 219Right-handed 310
Helix 32
32
D
238 253Right-handed alpha
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There are 20 sheets in PDB entry 3RHT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
4 8parallel
Strand 3
A
50 54parallel
Strand 4
A
78 82parallel
Strand 5
A
199 204parallel
Strand 6
A
184 196anti-parallel
Strand 7
A
161 169anti-parallel
Strand 8
A
121 125anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
155 156anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
150 152anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
179 181anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
234 237anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
4 8parallel
Strand 3
B
50 54parallel
Strand 4
B
78 82parallel
Strand 5
B
199 204parallel
Strand 6
B
184 196anti-parallel
Strand 7
B
161 169anti-parallel
Strand 8
B
121 125anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
155 156anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
150 152anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
179 181anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
234 237anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 33first strand
Strand 2
C
4 8parallel
Strand 3
C
50 54parallel
Strand 4
C
78 82parallel
Strand 5
C
199 204parallel
Strand 6
C
184 196anti-parallel
Strand 7
C
161 169anti-parallel
Strand 8
C
121 125anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
106 107first strand
Strand 2
C
155 156anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
114 116first strand
Strand 2
C
150 152anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
172 174first strand
Strand 2
C
179 181anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
223 226first strand
Strand 2
C
234 237anti-parallel
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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 33first strand
Strand 2
D
4 8parallel
Strand 3
D
50 54parallel
Strand 4
D
78 82parallel
Strand 5
D
199 204parallel
Strand 6
D
184 196anti-parallel
Strand 7
D
161 169anti-parallel
Strand 8
D
121 125anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
106 107first strand
Strand 2
D
155 156anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
114 116first strand
Strand 2
D
150 152anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
172 174first strand
Strand 2
D
179 181anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
223 226first strand
Strand 2
D
234 237anti-parallel
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