Analysis of interatomic Contacts of Structural Units in PDB entry:
3RIH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RIH entry

There are 4 chains in PDB entry 3RIH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 12PRO 271
B
 LYS 12PRO 271
C
 VAL 13PRO 271
D
 LYS 12PRO 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 3RIH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 42Right-handed alpha
Helix 2
2
A
52 55Right-handed 310
Helix 3
3
A
56 64Right-handed alpha
Helix 4
4
A
80 96Right-handed alpha
Helix 5
5
A
117 129Right-handed alpha
Helix 6
6
A
129 139Right-handed alpha
Helix 7
7
A
139 147Right-handed alpha
Helix 8
8
A
167 189Right-handed alpha
Helix 9
9
A
190 192Right-handed 310
Helix 10
10
A
205 211Right-handed alpha
Helix 11
11
A
212 221Right-handed alpha
Helix 12
12
A
230 243Right-handed alpha
Helix 13
13
A
244 247Right-handed 310
Helix 14
14
A
265 269Right-handed 310
Helix 15
15
B
29 42Right-handed alpha
Helix 16
16
B
52 55Right-handed 310
Helix 17
17
B
56 64Right-handed alpha
Helix 18
18
B
80 96Right-handed alpha
Helix 19
19
B
117 129Right-handed alpha
Helix 20
20
B
129 139Right-handed alpha
Helix 21
21
B
139 147Right-handed alpha
Helix 22
22
B
167 189Right-handed alpha
Helix 23
23
B
190 192Right-handed 310
Helix 24
24
B
205 210Right-handed alpha
Helix 25
25
B
212 221Right-handed alpha
Helix 26
26
B
230 243Right-handed alpha
Helix 27
27
B
244 247Right-handed 310
Helix 28
28
B
265 269Right-handed 310
Helix 29
29
C
29 42Right-handed alpha
Helix 30
30
C
52 65Right-handed alpha
Helix 31
31
C
80 96Right-handed alpha
Helix 32
32
C
117 129Right-handed alpha
Helix 33
33
C
129 147Right-handed alpha
Helix 34
34
C
167 189Right-handed alpha
Helix 35
35
C
190 192Right-handed 310
Helix 36
36
C
205 210Right-handed alpha
Helix 37
37
C
212 221Right-handed alpha
Helix 38
38
C
230 243Right-handed alpha
Helix 39
39
C
244 247Right-handed 310
Helix 40
40
C
265 269Right-handed 310
Helix 41
41
D
29 42Right-handed alpha
Helix 42
42
D
55 64Right-handed alpha
Helix 43
43
D
80 96Right-handed alpha
Helix 44
44
D
117 129Right-handed alpha
Helix 45
45
D
129 139Right-handed alpha
Helix 46
46
D
139 147Right-handed alpha
Helix 47
47
D
167 189Right-handed alpha
Helix 48
48
D
190 192Right-handed 310
Helix 49
49
D
205 210Right-handed alpha
Helix 50
50
D
212 221Right-handed alpha
Helix 51
51
D
230 243Right-handed alpha
Helix 52
52
D
244 247Right-handed 310
Helix 53
53
D
265 269Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 3RIH. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
45 50parallel
Strand 3
A
21 24parallel
Strand 4
A
100 103parallel
Strand 5
A
150 154parallel
Strand 6
A
194 200parallel
Strand 7
A
253 256parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
45 50parallel
Strand 3
B
21 24parallel
Strand 4
B
100 103parallel
Strand 5
B
150 154parallel
Strand 6
B
194 200parallel
Strand 7
B
253 256parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 75first strand
Strand 2
C
45 50parallel
Strand 3
C
21 24parallel
Strand 4
C
100 103parallel
Strand 5
C
150 154parallel
Strand 6
C
194 200parallel
Strand 7
C
253 256parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 75first strand
Strand 2
D
45 50parallel
Strand 3
D
21 24parallel
Strand 4
D
100 103parallel
Strand 5
D
150 154parallel
Strand 6
D
194 200parallel
Strand 7
D
253 256parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il