Analysis of interatomic Contacts of Structural Units in PDB entry:
3RIM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RIM entry

There are 4 chains in PDB entry 3RIM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6ASP 699
B
 ILE 7ASN 700
C
 ILE 7ASN 700
D
 ILE 7ASN 700
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are132 helices in PDB entry 3RIM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 11Right-handed alpha
Helix 2
2
A
20 42Right-handed alpha
Helix 3
3
A
46 52Right-handed alpha
Helix 4
4
A
52 62Right-handed alpha
Helix 5
5
A
86 97Right-handed alpha
Helix 6
6
A
102 107Right-handed alpha
Helix 7
7
A
136 157Right-handed alpha
Helix 8
8
A
177 182Right-handed alpha
Helix 9
9
A
182 195Right-handed alpha
Helix 10
10
A
216 218Right-handed 310
Helix 11
11
A
222 231Right-handed alpha
Helix 12
12
A
242 256Right-handed alpha
Helix 13
13
A
279 285Right-handed alpha
Helix 14
14
A
288 300Right-handed alpha
Helix 15
15
A
310 318Right-handed alpha
Helix 16
16
A
318 342Right-handed alpha
Helix 17
17
A
342 354Right-handed alpha
Helix 18
18
A
377 389Right-handed alpha
Helix 19
19
A
402 407Right-handed alpha
Helix 20
20
A
418 422Right-handed 310
Helix 21
21
A
440 455Right-handed alpha
Helix 22
22
A
466 470Right-handed 310
Helix 23
23
A
471 482Right-handed alpha
Helix 24
24
A
493 497Right-handed 310
Helix 25
25
A
507 514Right-handed alpha
Helix 26
26
A
525 538Right-handed alpha
Helix 27
27
A
562 569Right-handed alpha
Helix 28
28
A
595 608Right-handed alpha
Helix 29
29
A
620 627Right-handed alpha
Helix 30
30
A
628 636Right-handed alpha
Helix 31
31
A
651 653Right-handed 310
Helix 32
32
A
654 659Right-handed alpha
Helix 33
33
A
675 683Right-handed alpha
Helix 34
34
A
686 699Right-handed alpha
Helix 35
35
B
20 42Right-handed alpha
Helix 36
36
B
46 52Right-handed alpha
Helix 37
37
B
52 62Right-handed alpha
Helix 38
38
B
86 97Right-handed alpha
Helix 39
39
B
102 107Right-handed alpha
Helix 40
40
B
136 157Right-handed alpha
Helix 41
41
B
177 182Right-handed alpha
Helix 42
42
B
182 196Right-handed alpha
Helix 43
43
B
216 218Right-handed 310
Helix 44
44
B
222 231Right-handed alpha
Helix 45
45
B
242 256Right-handed alpha
Helix 46
46
B
279 285Right-handed alpha
Helix 47
47
B
288 300Right-handed alpha
Helix 48
48
B
310 318Right-handed alpha
Helix 49
49
B
318 342Right-handed alpha
Helix 50
50
B
342 354Right-handed alpha
Helix 51
51
B
377 389Right-handed alpha
Helix 52
52
B
402 407Right-handed alpha
Helix 53
53
B
418 422Right-handed 310
Helix 54
54
B
440 455Right-handed alpha
Helix 55
55
B
467 482Right-handed alpha
Helix 56
56
B
493 497Right-handed 310
Helix 57
57
B
507 514Right-handed alpha
Helix 58
58
B
525 538Right-handed alpha
Helix 59
59
B
562 569Right-handed alpha
Helix 60
60
B
595 608Right-handed alpha
Helix 61
61
B
620 627Right-handed alpha
Helix 62
62
B
628 636Right-handed alpha
Helix 63
63
B
651 653Right-handed 310
Helix 64
64
B
654 659Right-handed alpha
Helix 65
65
B
675 683Right-handed alpha
Helix 66
66
B
686 698Right-handed alpha
Helix 67
67
C
20 42Right-handed alpha
Helix 68
68
C
46 52Right-handed alpha
Helix 69
69
C
52 62Right-handed alpha
Helix 70
70
C
86 97Right-handed alpha
Helix 71
71
C
102 107Right-handed alpha
Helix 72
72
C
136 157Right-handed alpha
Helix 73
73
C
177 182Right-handed alpha
Helix 74
74
C
182 196Right-handed alpha
Helix 75
75
C
216 218Right-handed 310
Helix 76
76
C
222 231Right-handed alpha
Helix 77
77
C
242 256Right-handed alpha
Helix 78
78
C
280 285Right-handed alpha
Helix 79
79
C
288 300Right-handed alpha
Helix 80
80
C
310 318Right-handed alpha
Helix 81
81
C
318 342Right-handed alpha
Helix 82
82
C
342 354Right-handed alpha
Helix 83
83
C
377 389Right-handed alpha
Helix 84
84
C
402 407Right-handed alpha
Helix 85
85
C
418 422Right-handed 310
Helix 86
86
C
440 455Right-handed alpha
Helix 87
87
C
466 470Right-handed 310
Helix 88
88
C
471 482Right-handed alpha
Helix 89
89
C
493 497Right-handed 310
Helix 90
90
C
507 514Right-handed alpha
Helix 91
91
C
525 539Right-handed alpha
Helix 92
92
C
562 568Right-handed alpha
Helix 93
93
C
595 608Right-handed alpha
Helix 94
94
C
620 627Right-handed alpha
Helix 95
95
C
628 636Right-handed alpha
Helix 96
96
C
651 653Right-handed 310
Helix 97
97
C
654 659Right-handed alpha
Helix 98
98
C
675 683Right-handed alpha
Helix 99
99
C
686 699Right-handed alpha
Helix 100
100
D
20 42Right-handed alpha
Helix 101
101
D
46 62Right-handed alpha
Helix 102
102
D
83 85Right-handed 310
Helix 103
103
D
86 97Right-handed alpha
Helix 104
104
D
102 107Right-handed alpha
Helix 105
105
D
136 157Right-handed alpha
Helix 106
106
D
177 182Right-handed alpha
Helix 107
107
D
182 195Right-handed alpha
Helix 108
108
D
216 218Right-handed 310
Helix 109
109
D
222 231Right-handed alpha
Helix 110
110
D
242 256Right-handed alpha
Helix 111
111
D
280 285Right-handed alpha
Helix 112
112
D
288 300Right-handed alpha
Helix 113
113
D
310 318Right-handed alpha
Helix 114
114
D
318 342Right-handed alpha
Helix 115
115
D
342 354Right-handed alpha
Helix 116
116
D
377 389Right-handed alpha
Helix 117
117
D
390 392Right-handed 310
Helix 118
118
D
402 407Right-handed alpha
Helix 119
119
D
418 422Right-handed 310
Helix 120
120
D
440 455Right-handed alpha
Helix 121
121
D
467 482Right-handed alpha
Helix 122
122
D
493 500Right-handed 310
Helix 123
123
D
507 514Right-handed alpha
Helix 124
124
D
525 539Right-handed alpha
Helix 125
125
D
562 567Right-handed alpha
Helix 126
126
D
595 608Right-handed alpha
Helix 127
127
D
620 627Right-handed alpha
Helix 128
128
D
628 636Right-handed alpha
Helix 129
129
D
651 653Right-handed 310
Helix 130
130
D
654 659Right-handed alpha
Helix 131
131
D
675 684Right-handed alpha
Helix 132
132
D
686 700Right-handed alpha
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There are 24 sheets in PDB entry 3RIM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
171 176parallel
Strand 3
A
200 206parallel
Strand 4
A
261 266parallel
Strand 5
A
233 238parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
213 214anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 376first strand
Strand 2
A
554 555anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
434 436first strand
Strand 2
A
395 399parallel
Strand 3
A
458 464parallel
Strand 4
A
486 490parallel
Strand 5
A
546 549parallel
Strand 6
A
519 521parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 416first strand
Strand 2
A
428 429parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 574first strand
Strand 2
A
613 617anti-parallel
Strand 3
A
587 591parallel
Strand 4
A
643 646parallel
Strand 5
A
663 665parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
171 176parallel
Strand 3
B
200 206parallel
Strand 4
B
261 266parallel
Strand 5
B
233 238parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 210first strand
Strand 2
B
213 214anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
375 376first strand
Strand 2
B
554 555anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
434 436first strand
Strand 2
B
395 399parallel
Strand 3
B
458 464parallel
Strand 4
B
486 490parallel
Strand 5
B
546 549parallel
Strand 6
B
519 521parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
415 416first strand
Strand 2
B
428 429parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
571 574first strand
Strand 2
B
613 617anti-parallel
Strand 3
B
587 591parallel
Strand 4
B
643 646parallel
Strand 5
B
663 665parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 81first strand
Strand 2
C
171 176parallel
Strand 3
C
200 206parallel
Strand 4
C
261 266parallel
Strand 5
C
233 238parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
209 210first strand
Strand 2
C
213 214anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
375 376first strand
Strand 2
C
554 555anti-parallel
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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
434 436first strand
Strand 2
C
395 399parallel
Strand 3
C
458 464parallel
Strand 4
C
486 490parallel
Strand 5
C
546 549parallel
Strand 6
C
519 521parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
415 416first strand
Strand 2
C
428 429parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
571 574first strand
Strand 2
C
613 617anti-parallel
Strand 3
C
587 591parallel
Strand 4
C
643 646parallel
Strand 5
C
663 665parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 81first strand
Strand 2
D
171 176parallel
Strand 3
D
200 206parallel
Strand 4
D
261 266parallel
Strand 5
D
233 238parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
209 210first strand
Strand 2
D
213 214anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
375 376first strand
Strand 2
D
554 555anti-parallel
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There are 6 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
434 436first strand
Strand 2
D
395 399parallel
Strand 3
D
458 464parallel
Strand 4
D
486 490parallel
Strand 5
D
546 549parallel
Strand 6
D
519 521parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
415 416first strand
Strand 2
D
428 429parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
571 574first strand
Strand 2
D
613 617anti-parallel
Strand 3
D
587 591parallel
Strand 4
D
643 646parallel
Strand 5
D
663 665parallel
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