Analysis of interatomic Contacts of Structural Units in PDB entry:
3RIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RIU entry

There are 3 chains in PDB entry 3RIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8ILE 215
B
 LEU 7VAL 213
C
 VAL 31VAL 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3RIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 48Right-handed alpha
Helix 2
2
A
49 50Right-handed 310
Helix 3
3
A
51 53Right-handed 310
Helix 4
4
A
54 79Right-handed alpha
Helix 5
5
A
84 89Right-handed alpha
Helix 6
6
A
92 111Right-handed alpha
Helix 7
7
A
116 124Right-handed alpha
Helix 8
8
A
137 162Right-handed alpha
Helix 9
9
A
166 184Right-handed alpha
Helix 10
10
A
192 213Right-handed alpha
Helix 11
11
B
9 51Right-handed alpha
Helix 12
12
B
54 80Right-handed alpha
Helix 13
13
B
89 111Right-handed alpha
Helix 14
14
B
116 124Right-handed alpha
Helix 15
15
B
129 133Right-handed 310
Helix 16
16
B
137 162Right-handed alpha
Helix 17
17
B
166 184Right-handed alpha
Helix 18
18
B
193 212Right-handed alpha
Helix 19
19
C
33 69Right-handed alpha
Helix 20
20
C
80 103Right-handed alpha
Helix 21
21
C
110 116Right-handed 310
Helix 22
22
C
117 134Right-handed alpha
Helix 23
23
C
150 159Right-handed alpha
Helix 24
24
C
195 216Right-handed alpha
Helix 25
25
C
224 238Right-handed alpha
Helix 26
26
C
250 272Right-handed alpha
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There are no sheets in PDB entry 3RIU
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il