Analysis of interatomic Contacts of Structural Units in PDB entry:
3RJO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RJO entry

There is 1 chain in PDB entry 3RJO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 529HIS 947
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3RJO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
612 628Right-handed alpha
Helix 2
2
A
629 631Right-handed 310
Helix 3
3
A
632 649Right-handed alpha
Helix 4
4
A
653 662Right-handed alpha
Helix 5
5
A
663 667Right-handed 310
Helix 6
6
A
669 688Right-handed alpha
Helix 7
7
A
692 714Right-handed alpha
Helix 8
8
A
721 738Right-handed alpha
Helix 9
9
A
740 757Right-handed alpha
Helix 10
10
A
764 766Right-handed 310
Helix 11
11
A
767 776Right-handed alpha
Helix 12
12
A
778 792Right-handed alpha
Helix 13
13
A
794 806Right-handed alpha
Helix 14
14
A
810 824Right-handed alpha
Helix 15
15
A
828 830Right-handed 310
Helix 16
16
A
831 841Right-handed alpha
Helix 17
17
A
845 865Right-handed alpha
Helix 18
18
A
868 878Right-handed alpha
Helix 19
19
A
884 897Right-handed alpha
Helix 20
20
A
905 942Right-handed alpha
Helix 21
21
A
943 947Right-handed 310
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There are 2 sheets in PDB entry 3RJO. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
586 590first strand
Strand 2
A
541 549anti-parallel
Strand 3
A
530 538anti-parallel
Strand 4
A
609 611parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 582first strand
Strand 2
A
565 571anti-parallel
Strand 3
A
598 602anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il