Analysis of interatomic Contacts of Structural Units in PDB entry:
3RKI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RKI entry

There are 3 chains in PDB entry 3RKI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 26ASN 517
B
 GLN 26ASN 517
C
 GLN 26SER 485
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 3RKI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 36Right-handed 310
Helix 2
2
A
77 95Right-handed alpha
Helix 3
3
A
96 98Right-handed 310
Helix 4
4
A
153 202Right-handed alpha
Helix 5
5
A
202 227Right-handed alpha
Helix 6
6
A
227 241Right-handed alpha
Helix 7
7
A
253 264Right-handed alpha
Helix 8
8
A
267 276Right-handed alpha
Helix 9
9
A
277 285Right-handed alpha
Helix 10
10
A
354 356Right-handed 310
Helix 11
11
A
370 372Right-handed 310
Helix 12
12
A
376 384Right-handed 310
Helix 13
13
A
484 514Right-handed alpha
Helix 14
14
B
34 36Right-handed 310
Helix 15
15
B
77 95Right-handed alpha
Helix 16
16
B
96 98Right-handed 310
Helix 17
17
B
153 202Right-handed alpha
Helix 18
18
B
202 227Right-handed alpha
Helix 19
19
B
227 240Right-handed alpha
Helix 20
20
B
253 264Right-handed alpha
Helix 21
21
B
267 276Right-handed alpha
Helix 22
22
B
277 284Right-handed alpha
Helix 23
23
B
354 358Right-handed 310
Helix 24
24
B
370 372Right-handed 310
Helix 25
25
B
376 384Right-handed 310
Helix 26
26
B
484 514Right-handed alpha
Helix 27
27
C
34 36Right-handed 310
Helix 28
28
C
77 96Right-handed alpha
Helix 29
29
C
157 202Right-handed alpha
Helix 30
30
C
202 227Right-handed alpha
Helix 31
31
C
227 240Right-handed alpha
Helix 32
32
C
253 264Right-handed alpha
Helix 33
33
C
267 276Right-handed alpha
Helix 34
34
C
277 285Right-handed alpha
Helix 35
35
C
354 356Right-handed 310
Helix 36
36
C
370 372Right-handed 310
Helix 37
37
C
376 384Right-handed 310
Helix 38
38
C
484 514Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3RKI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il