Analysis of interatomic Contacts of Structural Units in PDB entry:
3RM5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RM5 entry

There are 2 chains in PDB entry 3RM5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 551
B
 THR 2GLU 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 3RM5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 19Right-handed 310
Helix 2
2
A
38 50Right-handed alpha
Helix 3
3
A
76 91Right-handed alpha
Helix 4
4
A
102 117Right-handed alpha
Helix 5
5
A
118 120Right-handed 310
Helix 6
6
A
141 150Right-handed alpha
Helix 7
7
A
151 154Right-handed 310
Helix 8
8
A
160 169Right-handed alpha
Helix 9
9
A
177 192Right-handed alpha
Helix 10
10
A
240 255Right-handed alpha
Helix 11
11
A
258 277Right-handed alpha
Helix 12
12
A
299 306Right-handed alpha
Helix 13
13
A
332 340Right-handed alpha
Helix 14
14
A
343 352Right-handed alpha
Helix 15
15
A
353 361Right-handed alpha
Helix 16
16
A
365 394Right-handed alpha
Helix 17
17
A
396 424Right-handed alpha
Helix 18
18
A
439 456Right-handed alpha
Helix 19
19
A
457 478Right-handed alpha
Helix 20
20
A
489 498Right-handed alpha
Helix 21
21
A
500 519Right-handed alpha
Helix 22
22
A
522 524Right-handed 310
Helix 23
23
A
525 549Right-handed alpha
Helix 24
24
B
14 19Right-handed 310
Helix 25
25
B
38 50Right-handed alpha
Helix 26
26
B
76 91Right-handed alpha
Helix 27
27
B
102 117Right-handed alpha
Helix 28
28
B
118 120Right-handed 310
Helix 29
29
B
140 150Right-handed alpha
Helix 30
30
B
151 154Right-handed 310
Helix 31
31
B
160 168Right-handed alpha
Helix 32
32
B
176 192Right-handed alpha
Helix 33
33
B
240 256Right-handed alpha
Helix 34
34
B
258 277Right-handed alpha
Helix 35
35
B
299 306Right-handed alpha
Helix 36
36
B
332 339Right-handed alpha
Helix 37
37
B
343 352Right-handed alpha
Helix 38
38
B
353 361Right-handed alpha
Helix 39
39
B
365 394Right-handed alpha
Helix 40
40
B
396 424Right-handed alpha
Helix 41
41
B
429 433Right-handed 310
Helix 42
42
B
439 456Right-handed alpha
Helix 43
43
B
457 478Right-handed alpha
Helix 44
44
B
489 498Right-handed alpha
Helix 45
45
B
500 517Right-handed alpha
Helix 46
46
B
522 524Right-handed 310
Helix 47
47
B
525 548Right-handed alpha
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There are 5 sheets in PDB entry 3RM5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
B
224 229parallel
Strand 3
B
214 219anti-parallel
Strand 4
B
195 200anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
53 64anti-parallel
Strand 3
A
25 31parallel
Strand 4
A
95 98parallel
Strand 5
A
122 125parallel
Strand 6
A
156 157parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 200first strand
Strand 2
A
212 219anti-parallel
Strand 3
A
224 231anti-parallel
Strand 4
B
3 7parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 58first strand
Strand 2
B
25 30parallel
Strand 3
B
95 98parallel
Strand 4
B
122 125parallel
Strand 5
B
156 157parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 64first strand
Strand 2
B
69 71anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il