Analysis of interatomic Contacts of Structural Units in PDB entry:
3RMJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RMJ entry

There are 2 chains in PDB entry 3RMJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ALA 324
B
 THR 4ALA 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3RMJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 41Right-handed alpha
Helix 2
2
A
53 65Right-handed alpha
Helix 3
3
A
79 91Right-handed alpha
Helix 4
4
A
105 112Right-handed alpha
Helix 5
5
A
116 132Right-handed alpha
Helix 6
6
A
144 148Right-handed 310
Helix 7
7
A
149 164Right-handed alpha
Helix 8
8
A
178 193Right-handed alpha
Helix 9
9
A
195 199Right-handed 310
Helix 10
10
A
211 222Right-handed alpha
Helix 11
11
A
230 234Right-handed 310
Helix 12
12
A
242 253Right-handed alpha
Helix 13
13
A
253 258Right-handed alpha
Helix 14
14
A
264 266Right-handed 310
Helix 15
15
A
267 280Right-handed alpha
Helix 16
16
A
318 322Right-handed 310
Helix 17
17
B
26 41Right-handed alpha
Helix 18
18
B
53 65Right-handed alpha
Helix 19
19
B
79 91Right-handed alpha
Helix 20
20
B
105 112Right-handed alpha
Helix 21
21
B
116 132Right-handed alpha
Helix 22
22
B
144 148Right-handed 310
Helix 23
23
B
149 164Right-handed alpha
Helix 24
24
B
178 193Right-handed alpha
Helix 25
25
B
195 199Right-handed 310
Helix 26
26
B
211 222Right-handed alpha
Helix 27
27
B
230 234Right-handed 310
Helix 28
28
B
242 253Right-handed alpha
Helix 29
29
B
253 258Right-handed alpha
Helix 30
30
B
264 266Right-handed 310
Helix 31
31
B
267 280Right-handed alpha
Helix 32
32
B
318 322Right-handed 310
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There are 2 sheets in PDB entry 3RMJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
44 49parallel
Strand 3
A
71 77parallel
Strand 4
A
96 103parallel
Strand 5
A
138 143parallel
Strand 6
A
167 171parallel
Strand 7
A
200 204parallel
Strand 8
A
226 229parallel
Strand 9
A
8 11parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 11first strand
Strand 2
B
44 49parallel
Strand 3
B
71 77parallel
Strand 4
B
96 103parallel
Strand 5
B
138 143parallel
Strand 6
B
167 171parallel
Strand 7
B
200 204parallel
Strand 8
B
226 229parallel
Strand 9
B
8 11parallel
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