Analysis of interatomic Contacts of Structural Units in PDB entry:
3RO6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RO6 entry

There are 4 chains in PDB entry 3RO6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1TYR 354
A
 MET 1PRO 355
C
 MET 1PRO 355
D
 MET 1GLY 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 3RO6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
51 56Right-handed alpha
Helix 2
2
B
58 67Right-handed alpha
Helix 3
3
B
68 71Right-handed 310
Helix 4
4
B
78 80Right-handed 310
Helix 5
5
B
81 93Right-handed alpha
Helix 6
6
B
96 116Right-handed alpha
Helix 7
7
B
118 123Right-handed alpha
Helix 8
8
B
140 154Right-handed alpha
Helix 9
9
B
166 182Right-handed alpha
Helix 10
10
B
196 210Right-handed alpha
Helix 11
11
B
223 229Right-handed alpha
Helix 12
12
B
231 237Right-handed alpha
Helix 13
13
B
246 255Right-handed alpha
Helix 14
14
B
266 271Right-handed alpha
Helix 15
15
B
272 287Right-handed alpha
Helix 16
16
B
298 311Right-handed alpha
Helix 17
17
A
51 56Right-handed alpha
Helix 18
18
A
58 66Right-handed alpha
Helix 19
19
A
71 75Right-handed 310
Helix 20
20
A
78 80Right-handed 310
Helix 21
21
A
81 93Right-handed alpha
Helix 22
22
A
96 116Right-handed alpha
Helix 23
23
A
118 124Right-handed alpha
Helix 24
24
A
140 154Right-handed alpha
Helix 25
25
A
166 181Right-handed alpha
Helix 26
26
A
196 211Right-handed alpha
Helix 27
27
A
223 229Right-handed alpha
Helix 28
28
A
231 236Right-handed alpha
Helix 29
29
A
246 255Right-handed alpha
Helix 30
30
A
266 271Right-handed alpha
Helix 31
31
A
272 286Right-handed alpha
Helix 32
32
A
298 311Right-handed alpha
Helix 33
33
C
51 56Right-handed alpha
Helix 34
34
C
58 66Right-handed alpha
Helix 35
35
C
71 75Right-handed 310
Helix 36
36
C
78 80Right-handed 310
Helix 37
37
C
81 93Right-handed alpha
Helix 38
38
C
96 116Right-handed alpha
Helix 39
39
C
118 124Right-handed alpha
Helix 40
40
C
140 154Right-handed alpha
Helix 41
41
C
166 182Right-handed alpha
Helix 42
42
C
196 211Right-handed alpha
Helix 43
43
C
220 222Right-handed 310
Helix 44
44
C
223 229Right-handed alpha
Helix 45
45
C
231 236Right-handed alpha
Helix 46
46
C
246 255Right-handed alpha
Helix 47
47
C
266 271Right-handed alpha
Helix 48
48
C
272 287Right-handed alpha
Helix 49
49
C
298 311Right-handed alpha
Helix 50
50
C
320 324Right-handed 310
Helix 51
51
D
51 56Right-handed alpha
Helix 52
52
D
58 67Right-handed alpha
Helix 53
53
D
68 75Right-handed 310
Helix 54
54
D
78 80Right-handed 310
Helix 55
55
D
81 93Right-handed alpha
Helix 56
56
D
96 116Right-handed alpha
Helix 57
57
D
118 124Right-handed alpha
Helix 58
58
D
140 154Right-handed alpha
Helix 59
59
D
166 182Right-handed alpha
Helix 60
60
D
196 211Right-handed alpha
Helix 61
61
D
223 229Right-handed alpha
Helix 62
62
D
231 237Right-handed alpha
Helix 63
63
D
246 255Right-handed alpha
Helix 64
64
D
266 271Right-handed alpha
Helix 65
65
D
272 286Right-handed alpha
Helix 66
66
D
298 311Right-handed alpha
Helix 67
67
E
51 56Right-handed alpha
Helix 68
68
E
58 66Right-handed alpha
Helix 69
69
E
67 75Right-handed 310
Helix 70
70
E
78 80Right-handed 310
Helix 71
71
E
81 93Right-handed alpha
Helix 72
72
E
96 116Right-handed alpha
Helix 73
73
E
118 124Right-handed alpha
Helix 74
74
E
140 154Right-handed alpha
Helix 75
75
E
166 182Right-handed alpha
Helix 76
76
E
196 211Right-handed alpha
Helix 77
77
E
223 229Right-handed alpha
Helix 78
78
E
231 237Right-handed alpha
Helix 79
79
E
246 255Right-handed alpha
Helix 80
80
E
266 271Right-handed alpha
Helix 81
81
E
272 287Right-handed alpha
Helix 82
82
E
298 311Right-handed alpha
Helix 83
83
E
320 324Right-handed 310
Helix 84
84
F
51 56Right-handed alpha
Helix 85
85
F
58 66Right-handed alpha
Helix 86
86
F
71 75Right-handed 310
Helix 87
87
F
78 80Right-handed 310
Helix 88
88
F
81 93Right-handed alpha
Helix 89
89
F
96 116Right-handed alpha
Helix 90
90
F
118 124Right-handed alpha
Helix 91
91
F
140 154Right-handed alpha
Helix 92
92
F
166 182Right-handed alpha
Helix 93
93
F
196 211Right-handed alpha
Helix 94
94
F
223 229Right-handed alpha
Helix 95
95
F
231 236Right-handed alpha
Helix 96
96
F
246 255Right-handed alpha
Helix 97
97
F
266 271Right-handed alpha
Helix 98
98
F
272 286Right-handed alpha
Helix 99
99
F
298 311Right-handed alpha
Helix 100
100
F
320 324Right-handed 310
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There are 30 sheets in PDB entry 3RO6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 14first strand
Strand 2
B
28 38anti-parallel
Strand 3
B
43 48anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 131first strand
Strand 2
B
341 343anti-parallel
Strand 3
B
336 338anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
158 162parallel
Strand 3
B
186 190parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 216first strand
Strand 2
B
238 240parallel
Strand 3
B
262 265parallel
Strand 4
B
289 292parallel
Strand 5
B
315 318parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 333first strand
Strand 2
B
352 353anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 14first strand
Strand 2
A
28 38anti-parallel
Strand 3
A
43 48anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
341 343anti-parallel
Strand 3
A
336 338anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
158 162parallel
Strand 3
A
186 190parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
238 240parallel
Strand 3
A
262 265parallel
Strand 4
A
289 292parallel
Strand 5
A
315 318parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
352 353anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 14first strand
Strand 2
C
28 38anti-parallel
Strand 3
C
43 48anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
130 131first strand
Strand 2
C
341 344anti-parallel
Strand 3
C
335 338anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 136first strand
Strand 2
C
158 162parallel
Strand 3
C
186 190parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
215 216first strand
Strand 2
C
238 240parallel
Strand 3
C
262 265parallel
Strand 4
C
289 292parallel
Strand 5
C
315 318parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
332 333first strand
Strand 2
C
352 353anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 13first strand
Strand 2
D
29 38anti-parallel
Strand 3
D
43 48anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
130 131first strand
Strand 2
D
341 343anti-parallel
Strand 3
D
336 338anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 136first strand
Strand 2
D
158 162parallel
Strand 3
D
186 190parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 216first strand
Strand 2
D
238 240parallel
Strand 3
D
262 265parallel
Strand 4
D
289 292parallel
Strand 5
D
315 318parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
332 333first strand
Strand 2
D
352 353anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 14first strand
Strand 2
E
28 38anti-parallel
Strand 3
E
43 48anti-parallel
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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
130 131first strand
Strand 2
E
341 343anti-parallel
Strand 3
E
336 338anti-parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
133 136first strand
Strand 2
E
158 162parallel
Strand 3
E
186 190parallel
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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
215 216first strand
Strand 2
E
238 240parallel
Strand 3
E
262 265parallel
Strand 4
E
289 292parallel
Strand 5
E
315 318parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
332 333first strand
Strand 2
E
352 353anti-parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
3 14first strand
Strand 2
F
28 38anti-parallel
Strand 3
F
43 48anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
130 131first strand
Strand 2
F
341 343anti-parallel
Strand 3
F
336 338anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
133 136first strand
Strand 2
F
158 162parallel
Strand 3
F
186 190parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
215 216first strand
Strand 2
F
238 240parallel
Strand 3
F
262 265parallel
Strand 4
F
289 292parallel
Strand 5
F
315 318parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
332 333first strand
Strand 2
F
352 353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il