Analysis of interatomic Contacts of Structural Units in PDB entry:
3ROF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3ROF entry

There are 2 chains in PDB entry 3ROF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -4GLY 153
B
 HIS 49SER 55
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3ROF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
51 61Right-handed alpha
Helix 3
3
A
86 97Right-handed alpha
Helix 4
4
A
108 111Right-handed 310
Helix 5
5
A
120 125Right-handed alpha
Helix 6
6
A
126 149Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3ROF.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 40first strand
Strand 2
A
2 8parallel
Strand 3
A
81 84parallel
Strand 4
A
103 106parallel
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