Analysis of interatomic Contacts of Structural Units in PDB entry:
3RON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RON entry

There are 2 chains in PDB entry 3RON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 38ILE 238
B
 ASN 38THR 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3RON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 50Right-handed 310
Helix 2
2
A
51 63Right-handed alpha
Helix 3
3
A
80 91Right-handed alpha
Helix 4
4
A
112 128Right-handed alpha
Helix 5
5
A
128 135Right-handed alpha
Helix 6
6
A
135 148Right-handed alpha
Helix 7
7
A
150 154Right-handed 310
Helix 8
8
A
202 207Right-handed alpha
Helix 9
9
B
48 50Right-handed 310
Helix 10
10
B
51 64Right-handed alpha
Helix 11
11
B
80 91Right-handed alpha
Helix 12
12
B
112 128Right-handed alpha
Helix 13
13
B
128 135Right-handed alpha
Helix 14
14
B
135 148Right-handed alpha
Helix 15
15
B
149 154Right-handed alpha
Helix 16
16
B
181 185Right-handed 310
Helix 17
17
B
202 209Right-handed alpha
Helix 18
18
B
232 236Right-handed 310
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There are 6 sheets in PDB entry 3RON. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 46first strand
Strand 2
A
168 180parallel
Strand 3
A
187 199anti-parallel
Strand 4
A
214 229anti-parallel
Strand 5
A
96 111anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 46first strand
Strand 2
A
168 180parallel
Strand 3
A
159 165anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
77 79anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 46first strand
Strand 2
B
168 180parallel
Strand 3
B
187 199anti-parallel
Strand 4
B
214 229anti-parallel
Strand 5
B
96 111anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 46first strand
Strand 2
B
168 180parallel
Strand 3
B
159 165anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
77 79anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il