Analysis of interatomic Contacts of Structural Units in PDB entry:
3RQZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RQZ entry

There are 3 chains in PDB entry 3RQZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -1VAL 243
B
 MSE 1VAL 243
C
 ASN -1VAL 243
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3RQZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 24Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
60 67Right-handed alpha
Helix 4
4
A
76 80Right-handed 310
Helix 5
5
A
81 90Right-handed alpha
Helix 6
6
A
91 101Right-handed alpha
Helix 7
7
A
127 135Right-handed alpha
Helix 8
8
A
136 138Right-handed 310
Helix 9
9
A
156 161Right-handed alpha
Helix 10
10
A
218 230Right-handed alpha
Helix 11
11
A
232 242Right-handed alpha
Helix 12
12
B
12 24Right-handed alpha
Helix 13
13
B
41 53Right-handed alpha
Helix 14
14
B
60 67Right-handed alpha
Helix 15
15
B
76 80Right-handed 310
Helix 16
16
B
81 90Right-handed alpha
Helix 17
17
B
91 100Right-handed alpha
Helix 18
18
B
127 135Right-handed alpha
Helix 19
19
B
136 138Right-handed 310
Helix 20
20
B
156 161Right-handed alpha
Helix 21
21
B
218 230Right-handed alpha
Helix 22
22
B
232 242Right-handed alpha
Helix 23
23
C
12 23Right-handed alpha
Helix 24
24
C
41 53Right-handed alpha
Helix 25
25
C
60 67Right-handed alpha
Helix 26
26
C
76 80Right-handed 310
Helix 27
27
C
81 90Right-handed alpha
Helix 28
28
C
91 101Right-handed alpha
Helix 29
29
C
127 135Right-handed alpha
Helix 30
30
C
136 138Right-handed 310
Helix 31
31
C
156 161Right-handed alpha
Helix 32
32
C
218 229Right-handed alpha
Helix 33
33
C
232 242Right-handed alpha
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There are 6 sheets in PDB entry 3RQZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
28 31parallel
Strand 3
A
3 6parallel
Strand 4
A
198 204anti-parallel
Strand 5
A
209 215anti-parallel
Strand 6
A
173 175anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
110 113anti-parallel
Strand 3
A
142 144parallel
Strand 4
A
181 185parallel
Strand 5
A
151 155anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
3 6parallel
Strand 3
B
198 204anti-parallel
Strand 4
B
209 215anti-parallel
Strand 5
B
173 175anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 107first strand
Strand 2
B
110 113anti-parallel
Strand 3
B
142 144parallel
Strand 4
B
181 184parallel
Strand 5
B
152 155anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
56 57first strand
Strand 2
C
28 31parallel
Strand 3
C
3 6parallel
Strand 4
C
198 204anti-parallel
Strand 5
C
209 215anti-parallel
Strand 6
C
173 175anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 107first strand
Strand 2
C
110 113anti-parallel
Strand 3
C
142 144parallel
Strand 4
C
181 185parallel
Strand 5
C
151 155anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il